ISMvi2
- Family IS1202
- Group ISAba32
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
LN554852 | ND | Moritella viscosa | Moritella viscosa MVIS1 |
DNA section
IS Length : 1492 bp
Ends
IR Length : 21/27
IRL : TGTTAACCCAATATAGTAATGTCACATTTCCCCAACTTAGAGATGTCACA
IRR : TGTAAAAGCAAGTTAGAAATGTCACATAGTTTACCAAAGTAGAAATGTCA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AAACCTGACATTTCTATC | GGGGACCTACATTGAT | ATTGCGCATTAGAGTCTTTA | 16 |
TTTTTATTATCGTT | ATGATGAGTGTGGATA | ATTTCACCCTTTTTTT | 16 |
DNA sequence
TGTTAACCCAATATAGTAATGTCACATTTCCCCAACTTAGAGATGTCACATTCTGATAGGATCTGTTCCATTAATAATCCTCTTCAGAGCTATGTGTCAT
GCTATTTGCTATGAGCCAAAAAGAATTAAATCGTGTTGATGTTATTCGTGACGTTTGTGAAAAGCGTTTAACCCAAGTAAATGCTTCAAATATCCTTAAC
TTAACGCGACGGCAGGTTCAGCGGTTAGTAAACAACTTTCGTAAAAATGGGGCGCAAGGGTTAGCCTCATTGAGAAGAGGAAAACCAAGTAATCGACAGT
TTTCACCTGCGTTTAAACAAAATGCACTGCGTATTATCAAAGATAAATACGCAGATTTTGGCCCTACCTTTGCAAATGAAAAGCTACTCGAACAGCACGG
TATTAAGCTTTCAGCAGAGACGTTACGTCACTGGATGATTGGTGAGGGCTTATGGAAATCCCGAGCAAAGCCTAAGAAAAAGACCTACCAGCCCAGGTAT
AGACGAGAATCTTTAGGTGAGCTTGTTCAGATTGATGGTTCACATCATGACTGGTTCGAAGGCCGCGCCGAAAAATGTTGTCTGCTGGTATTTATTGATG
ATGCCACCGGTAGATTAATGACATTACGCTTCAGTGAGGTAGAGTCAACATACGACTACATGAATGCGACGCGAGAATATATTGAGCAACATGGAAAGCC
AGTGGCTTTTTACAGTGACAAGCATTCCGTCTTTAGAATCAATAAGAAAGCGCCTCTTAGTGGTAATCAGATGACACAATACGGTCGTGCGTTGTATGAA
TTAAATATCGATTTAATTTGTGCTAACAGCTCTCAAGCTAAGGGGCGTGTTGAAAGGGCAAACAAAACCCTGCAAGACCGGCTAATCAAAGAAATGCGAC
TTGCAGGTATTGATTCAATGGAGCAAGCGAACGCATGGCTGCCTATTTTTATTGAAGATTTCAATCACCGCTTTGGTCGAGCACCGCATAGTTTAGAAGA
AGCACACCGCCTATTACGGGAAAGTTCAGAAGAGCTAGACGACATATTTGCGCGTCAAAAGACCCGTAAGGTATCGAACGCGTTAACATTGCAATACGAC
AAAGTGGTTTACCTGATAGAGCCTACGGATGCGACAGCGCGTTTAGCAGGTAAGAACGTCATGATATATGACTACCCGGATGGCACGTTGAGCATAAAGC
ATTGTGGTAAGGCATTGCCTTATCAAGTCTTCGATAAGCTGCGACAGGTGAATCAGGGGACTGTTGTTGATAATAAACGGTTGGGAGCAGCGTTGTCTTT
TGCTAAACGAAGTCAGGAAGAAAGAAATGACACGTTGGAGCGAACGAGAAGCGCGAAAACATTCAGCCGAACAGCACAAAAAAGAGCACGACAAATCAAT
CCTATTTTACGCGAATCACTAGAACCGGATAAATAACAAATGTGACATTTCTACTTTGGTAAACTATGTGACATTTCTAACTTGCTTTTACA
GCTATTTGCTATGAGCCAAAAAGAATTAAATCGTGTTGATGTTATTCGTGACGTTTGTGAAAAGCGTTTAACCCAAGTAAATGCTTCAAATATCCTTAAC
TTAACGCGACGGCAGGTTCAGCGGTTAGTAAACAACTTTCGTAAAAATGGGGCGCAAGGGTTAGCCTCATTGAGAAGAGGAAAACCAAGTAATCGACAGT
TTTCACCTGCGTTTAAACAAAATGCACTGCGTATTATCAAAGATAAATACGCAGATTTTGGCCCTACCTTTGCAAATGAAAAGCTACTCGAACAGCACGG
TATTAAGCTTTCAGCAGAGACGTTACGTCACTGGATGATTGGTGAGGGCTTATGGAAATCCCGAGCAAAGCCTAAGAAAAAGACCTACCAGCCCAGGTAT
AGACGAGAATCTTTAGGTGAGCTTGTTCAGATTGATGGTTCACATCATGACTGGTTCGAAGGCCGCGCCGAAAAATGTTGTCTGCTGGTATTTATTGATG
ATGCCACCGGTAGATTAATGACATTACGCTTCAGTGAGGTAGAGTCAACATACGACTACATGAATGCGACGCGAGAATATATTGAGCAACATGGAAAGCC
AGTGGCTTTTTACAGTGACAAGCATTCCGTCTTTAGAATCAATAAGAAAGCGCCTCTTAGTGGTAATCAGATGACACAATACGGTCGTGCGTTGTATGAA
TTAAATATCGATTTAATTTGTGCTAACAGCTCTCAAGCTAAGGGGCGTGTTGAAAGGGCAAACAAAACCCTGCAAGACCGGCTAATCAAAGAAATGCGAC
TTGCAGGTATTGATTCAATGGAGCAAGCGAACGCATGGCTGCCTATTTTTATTGAAGATTTCAATCACCGCTTTGGTCGAGCACCGCATAGTTTAGAAGA
AGCACACCGCCTATTACGGGAAAGTTCAGAAGAGCTAGACGACATATTTGCGCGTCAAAAGACCCGTAAGGTATCGAACGCGTTAACATTGCAATACGAC
AAAGTGGTTTACCTGATAGAGCCTACGGATGCGACAGCGCGTTTAGCAGGTAAGAACGTCATGATATATGACTACCCGGATGGCACGTTGAGCATAAAGC
ATTGTGGTAAGGCATTGCCTTATCAAGTCTTCGATAAGCTGCGACAGGTGAATCAGGGGACTGTTGTTGATAATAAACGGTTGGGAGCAGCGTTGTCTTT
TGCTAAACGAAGTCAGGAAGAAAGAAATGACACGTTGGAGCGAACGAGAAGCGCGAAAACATTCAGCCGAACAGCACAAAAAAGAGCACGACAAATCAAT
CCTATTTTACGCGAATCACTAGAACCGGATAAATAACAAATGTGACATTTCTACTTTGGTAAACTATGTGACATTTCTAACTTGCTTTTACA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1338 bp | 445 aa | 99 | 1436 | + | No |
Chemistry : DDE
ORF sequence :
MLFAMSQKELNRVDVIRDVCEKRLTQVNASNILNLTRRQVQRLVNNFRKNGAQGLASLRRGKPSNRQFSPAFKQNALRIIKDKYADFGPTFANEKLLEQH
GIKLSAETLRHWMIGEGLWKSRAKPKKKTYQPRYRRESLGELVQIDGSHHDWFEGRAEKCCLLVFIDDATGRLMTLRFSEVESTYDYMNATREYIEQHGK
PVAFYSDKHSVFRINKKAPLSGNQMTQYGRALYELNIDLICANSSQAKGRVERANKTLQDRLIKEMRLAGIDSMEQANAWLPIFIEDFNHRFGRAPHSLE
EAHRLLRESSEELDDIFARQKTRKVSNALTLQYDKVVYLIEPTDATARLAGKNVMIYDYPDGTLSIKHCGKALPYQVFDKLRQVNQGTVVDNKRLGAALS
FAKRSQEERNDTLERTRSAKTFSRTAQKRARQINPILRESLEPDK
GIKLSAETLRHWMIGEGLWKSRAKPKKKTYQPRYRRESLGELVQIDGSHHDWFEGRAEKCCLLVFIDDATGRLMTLRFSEVESTYDYMNATREYIEQHGK
PVAFYSDKHSVFRINKKAPLSGNQMTQYGRALYELNIDLICANSSQAKGRVERANKTLQDRLIKEMRLAGIDSMEQANAWLPIFIEDFNHRFGRAPHSLE
EAHRLLRESSEELDDIFARQKTRKVSNALTLQYDKVVYLIEPTDATARLAGKNVMIYDYPDGTLSIKHCGKALPYQVFDKLRQVNQGTVVDNKRLGAALS
FAKRSQEERNDTLERTRSAKTFSRTAQKRARQINPILRESLEPDK
Blast result :
Comments
ISMvi2 is 94% aa similar to ISPysp1.
References
1] Patricia Siguier(2020) Direct submission.
2] Hjerde,Erik. (2014) Direct GenBank submission.
2] Hjerde,Erik. (2014) Direct GenBank submission.