ISOesp1
- Family IS1202
- Group ISAba32
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
PZZV01000002 | ND | Oceanicaulis sp. | Oceanicaulis sp. PT13A |
DNA section
IS Length : 1824 bp
Ends
IR Length : 10/17
IRL : TGTAGCCGCAATTTAGTAATGTCCGCTTTGAGCCAGATAGAAATGTCCGC
IRR : TGTTCGCACTCTCTTAACCGTCAAGCGAGGTCGCCGACCTTGGAGTAGAC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ATTATAGTACGGGCCGG | TGAACCCTTTTTAACCACGC | 0 |
DNA sequence
TGTAGCCGCAATTTAGTAATGTCCGCTTTGAGCCAGATAGAAATGTCCGCGACTCCGGTCAGGCTCGTCTCGTCATGGGAGGAGCGGATCGATGCGGGAT
GTTTTCGACATGAGCAGGAAAGAGCTCGATCGCGCCGCCGTCCTGGACAAGCTCGCCGACGGACGACTGACCTCTCACGACGCCGCCGCTCTTCTGGACG
TGTCGAGACGGCAGGTGCGCCGGCTGCAGGCGGCCTATCGCGGCGGCGGGGCGATCGCGCTTCGCTCGGCCCGGCGCGGCGCGCCCTCGAACCGGGCCTA
TCCTTCCGGCTTCAAGGACGGCGTGCTTTCGATCATCGGCGCGCACTATGGCGATTTCGGGCCGACGCTTGCAGCCGAGAAGCTCGTCGAGCGCCACGGG
ATCGCGGTGTCGCGCGAGACGGTGCGCCAGTGGATGACCGAGGCCGGCTACTGGATCCCTCGCGCGCGACGAAAGACCGTGCATCAGCTGAGGCCGCGCC
GGGAGCGGTTCGGCGAGCTTATCCAGATCGACGGCTCGCTGCACGCCTGGTTCGAGGACCGCGGCCCCATGTGCAGCCTTCTGGTGTTCATCGACGATGC
GACGGGCCGGCTGGTCGATCTCCACTTCTGTCCGAGCGAGAGCACGTTCGACTACATGATCGCGGCCAAGCGCTATGTGGGCCGGTACGGCAAGCCCCTC
GCCTTCTACTCCGACAAGCACTCGATCTTCAGAAGTGCGAAGGAAAGCGAGACCGGCGGGGCGAACCTCACCCAGTTCGGCCGGGCTCTAAGCGAGCTCA
ACATCGACATCATCTGCGCCAACAGCCCTCAAGCAAAAGGCCGCGTGGAACGGGCGAACGGCACGCTCCAGGACCGGCTGGTGAAGGAGCTCCGGCTCGC
CGGCGTCTCCGACATCGCCGAGGCGAACGCGTTCGCGGAGCGATACCGGCACGTCCATAATGAGAAGTTCGCCGTCGCGCCGCGCTCGTCCGCCGACGCG
CACCGCCCCGTGGCGGCCCACGAAGATCTCGACCACGCGTTCTGCGTGAAGAGCGAGCGGGTCATCTCGCGCGCGCTAAGCGTCCAGTACGACAAGGTCC
GGTTCAATCTCGAGCCGAGCGCCTACGCCAAACGCATCGCCGGGAGAACCGTGACGATCTGCGATTATCCCGACGGCCGCTTGGTGATCGAGCATGGCGC
GGTCGCCCTGCCCTACACCCGGTTCGACACGCTGCAGCGCGTGGGCCGGCCGGAGATCGTCGAGAACAAGCGCCTCGGCGGCGCCCTCGCCTGGATCGCG
GAGCAACAGGCCGAGCGCGACCGTGAGCAGGCGCCTGCGCGCAGCGGCAACGCCCTGAAACGGCGCGGTCAAACCGGACACGGGTTCGCGACGCCGAAGC
CACAGGAACCGACGCCCGGCAAAGCGGCGCTGGCGCGCGCTAAGGACGCCCTGAAGAAGACGCAGCCCGCGCGCGCGGGCACCGAGCACGAGTGGGAACA
TCATATCCCCGGCGAGACGCGGCCCGCGCCCGATGTGCGAATCCTCAACAGAGGCACGGTGGTCGTGCGCAAGGTGTCGCGCATGCTTACCGTGAACCAT
CGCGGGATGCGCTATCGACTGATCGACGCGGCGCCTGAGACCCTGCTCGGCGAGACGATCTTGCTCTGCGAGCTCGAAGACGGCCATGTGGAGCTGTTCC
ACGGCTCACACCCCCTCGCCTGGCGGCGCAAGCGCGCCTACGAGACCCGCGGCGAGGATGACGGGCGCGCCCTCGTCTACTCCAAGGTCGGCGACCTCGC
TTGACGGTTAAGAGAGTGCGAACA
GTTTTCGACATGAGCAGGAAAGAGCTCGATCGCGCCGCCGTCCTGGACAAGCTCGCCGACGGACGACTGACCTCTCACGACGCCGCCGCTCTTCTGGACG
TGTCGAGACGGCAGGTGCGCCGGCTGCAGGCGGCCTATCGCGGCGGCGGGGCGATCGCGCTTCGCTCGGCCCGGCGCGGCGCGCCCTCGAACCGGGCCTA
TCCTTCCGGCTTCAAGGACGGCGTGCTTTCGATCATCGGCGCGCACTATGGCGATTTCGGGCCGACGCTTGCAGCCGAGAAGCTCGTCGAGCGCCACGGG
ATCGCGGTGTCGCGCGAGACGGTGCGCCAGTGGATGACCGAGGCCGGCTACTGGATCCCTCGCGCGCGACGAAAGACCGTGCATCAGCTGAGGCCGCGCC
GGGAGCGGTTCGGCGAGCTTATCCAGATCGACGGCTCGCTGCACGCCTGGTTCGAGGACCGCGGCCCCATGTGCAGCCTTCTGGTGTTCATCGACGATGC
GACGGGCCGGCTGGTCGATCTCCACTTCTGTCCGAGCGAGAGCACGTTCGACTACATGATCGCGGCCAAGCGCTATGTGGGCCGGTACGGCAAGCCCCTC
GCCTTCTACTCCGACAAGCACTCGATCTTCAGAAGTGCGAAGGAAAGCGAGACCGGCGGGGCGAACCTCACCCAGTTCGGCCGGGCTCTAAGCGAGCTCA
ACATCGACATCATCTGCGCCAACAGCCCTCAAGCAAAAGGCCGCGTGGAACGGGCGAACGGCACGCTCCAGGACCGGCTGGTGAAGGAGCTCCGGCTCGC
CGGCGTCTCCGACATCGCCGAGGCGAACGCGTTCGCGGAGCGATACCGGCACGTCCATAATGAGAAGTTCGCCGTCGCGCCGCGCTCGTCCGCCGACGCG
CACCGCCCCGTGGCGGCCCACGAAGATCTCGACCACGCGTTCTGCGTGAAGAGCGAGCGGGTCATCTCGCGCGCGCTAAGCGTCCAGTACGACAAGGTCC
GGTTCAATCTCGAGCCGAGCGCCTACGCCAAACGCATCGCCGGGAGAACCGTGACGATCTGCGATTATCCCGACGGCCGCTTGGTGATCGAGCATGGCGC
GGTCGCCCTGCCCTACACCCGGTTCGACACGCTGCAGCGCGTGGGCCGGCCGGAGATCGTCGAGAACAAGCGCCTCGGCGGCGCCCTCGCCTGGATCGCG
GAGCAACAGGCCGAGCGCGACCGTGAGCAGGCGCCTGCGCGCAGCGGCAACGCCCTGAAACGGCGCGGTCAAACCGGACACGGGTTCGCGACGCCGAAGC
CACAGGAACCGACGCCCGGCAAAGCGGCGCTGGCGCGCGCTAAGGACGCCCTGAAGAAGACGCAGCCCGCGCGCGCGGGCACCGAGCACGAGTGGGAACA
TCATATCCCCGGCGAGACGCGGCCCGCGCCCGATGTGCGAATCCTCAACAGAGGCACGGTGGTCGTGCGCAAGGTGTCGCGCATGCTTACCGTGAACCAT
CGCGGGATGCGCTATCGACTGATCGACGCGGCGCCTGAGACCCTGCTCGGCGAGACGATCTTGCTCTGCGAGCTCGAAGACGGCCATGTGGAGCTGTTCC
ACGGCTCACACCCCCTCGCCTGGCGGCGCAAGCGCGCCTACGAGACCCGCGGCGAGGATGACGGGCGCGCCCTCGTCTACTCCAAGGTCGGCGACCTCGC
TTGACGGTTAAGAGAGTGCGAACA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1713 bp | 570 aa | 92 | 1804 | + | No |
Chemistry : DDE
ORF sequence :
MRDVFDMSRKELDRAAVLDKLADGRLTSHDAAALLDVSRRQVRRLQAAYRGGGAIALRSARRGAPSNRAYPSGFKDGVLSIIGAHYGDFGPTLAAEKLVE
RHGIAVSRETVRQWMTEAGYWIPRARRKTVHQLRPRRERFGELIQIDGSLHAWFEDRGPMCSLLVFIDDATGRLVDLHFCPSESTFDYMIAAKRYVGRYG
KPLAFYSDKHSIFRSAKESETGGANLTQFGRALSELNIDIICANSPQAKGRVERANGTLQDRLVKELRLAGVSDIAEANAFAERYRHVHNEKFAVAPRSS
ADAHRPVAAHEDLDHAFCVKSERVISRALSVQYDKVRFNLEPSAYAKRIAGRTVTICDYPDGRLVIEHGAVALPYTRFDTLQRVGRPEIVENKRLGGALA
WIAEQQAERDREQAPARSGNALKRRGQTGHGFATPKPQEPTPGKAALARAKDALKKTQPARAGTEHEWEHHIPGETRPAPDVRILNRGTVVVRKVSRMLT
VNHRGMRYRLIDAAPETLLGETILLCELEDGHVELFHGSHPLAWRRKRAYETRGEDDGRALVYSKVGDLA
RHGIAVSRETVRQWMTEAGYWIPRARRKTVHQLRPRRERFGELIQIDGSLHAWFEDRGPMCSLLVFIDDATGRLVDLHFCPSESTFDYMIAAKRYVGRYG
KPLAFYSDKHSIFRSAKESETGGANLTQFGRALSELNIDIICANSPQAKGRVERANGTLQDRLVKELRLAGVSDIAEANAFAERYRHVHNEKFAVAPRSS
ADAHRPVAAHEDLDHAFCVKSERVISRALSVQYDKVRFNLEPSAYAKRIAGRTVTICDYPDGRLVIEHGAVALPYTRFDTLQRVGRPEIVENKRLGGALA
WIAEQQAERDREQAPARSGNALKRRGQTGHGFATPKPQEPTPGKAALARAKDALKKTQPARAGTEHEWEHHIPGETRPAPDVRILNRGTVVVRKVSRMLT
VNHRGMRYRLIDAAPETLLGETILLCELEDGHVELFHGSHPLAWRRKRAYETRGEDDGRALVYSKVGDLA
Blast result :
Comments
ISOesp1 is 68% aa similar to ISAlba4.
References
1] Patricia Siguier (2020) Direct submission.
2] Mayali,X. (2018) Direct GenBank submission.
2] Mayali,X. (2018) Direct GenBank submission.