ISOesp1

  • Family IS1202
  • Group ISAba32
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
PZZV01000002 ND Oceanicaulis sp.
Oceanicaulis sp. PT13A
DNA section
IS Length : 1824 bp

Ends


IR Length : 10/17

IRL : TGTAGCCGCAATTTAGTAATGTCCGCTTTGAGCCAGATAGAAATGTCCGC
IRR : TGTTCGCACTCTCTTAACCGTCAAGCGAGGTCGCCGACCTTGGAGTAGAC

Insertion site


Left flankDirect repeatRight flankDR Length
ATTATAGTACGGGCCGGTGAACCCTTTTTAACCACGC0

DNA sequence

TGTAGCCGCAATTTAGTAATGTCCGCTTTGAGCCAGATAGAAATGTCCGCGACTCCGGTCAGGCTCGTCTCGTCATGGGAGGAGCGGATCGATGCGGGAT
GTTTTCGACATGAGCAGGAAAGAGCTCGATCGCGCCGCCGTCCTGGACAAGCTCGCCGACGGACGACTGACCTCTCACGACGCCGCCGCTCTTCTGGACG
TGTCGAGACGGCAGGTGCGCCGGCTGCAGGCGGCCTATCGCGGCGGCGGGGCGATCGCGCTTCGCTCGGCCCGGCGCGGCGCGCCCTCGAACCGGGCCTA
TCCTTCCGGCTTCAAGGACGGCGTGCTTTCGATCATCGGCGCGCACTATGGCGATTTCGGGCCGACGCTTGCAGCCGAGAAGCTCGTCGAGCGCCACGGG
ATCGCGGTGTCGCGCGAGACGGTGCGCCAGTGGATGACCGAGGCCGGCTACTGGATCCCTCGCGCGCGACGAAAGACCGTGCATCAGCTGAGGCCGCGCC
GGGAGCGGTTCGGCGAGCTTATCCAGATCGACGGCTCGCTGCACGCCTGGTTCGAGGACCGCGGCCCCATGTGCAGCCTTCTGGTGTTCATCGACGATGC
GACGGGCCGGCTGGTCGATCTCCACTTCTGTCCGAGCGAGAGCACGTTCGACTACATGATCGCGGCCAAGCGCTATGTGGGCCGGTACGGCAAGCCCCTC
GCCTTCTACTCCGACAAGCACTCGATCTTCAGAAGTGCGAAGGAAAGCGAGACCGGCGGGGCGAACCTCACCCAGTTCGGCCGGGCTCTAAGCGAGCTCA
ACATCGACATCATCTGCGCCAACAGCCCTCAAGCAAAAGGCCGCGTGGAACGGGCGAACGGCACGCTCCAGGACCGGCTGGTGAAGGAGCTCCGGCTCGC
CGGCGTCTCCGACATCGCCGAGGCGAACGCGTTCGCGGAGCGATACCGGCACGTCCATAATGAGAAGTTCGCCGTCGCGCCGCGCTCGTCCGCCGACGCG
CACCGCCCCGTGGCGGCCCACGAAGATCTCGACCACGCGTTCTGCGTGAAGAGCGAGCGGGTCATCTCGCGCGCGCTAAGCGTCCAGTACGACAAGGTCC
GGTTCAATCTCGAGCCGAGCGCCTACGCCAAACGCATCGCCGGGAGAACCGTGACGATCTGCGATTATCCCGACGGCCGCTTGGTGATCGAGCATGGCGC
GGTCGCCCTGCCCTACACCCGGTTCGACACGCTGCAGCGCGTGGGCCGGCCGGAGATCGTCGAGAACAAGCGCCTCGGCGGCGCCCTCGCCTGGATCGCG
GAGCAACAGGCCGAGCGCGACCGTGAGCAGGCGCCTGCGCGCAGCGGCAACGCCCTGAAACGGCGCGGTCAAACCGGACACGGGTTCGCGACGCCGAAGC
CACAGGAACCGACGCCCGGCAAAGCGGCGCTGGCGCGCGCTAAGGACGCCCTGAAGAAGACGCAGCCCGCGCGCGCGGGCACCGAGCACGAGTGGGAACA
TCATATCCCCGGCGAGACGCGGCCCGCGCCCGATGTGCGAATCCTCAACAGAGGCACGGTGGTCGTGCGCAAGGTGTCGCGCATGCTTACCGTGAACCAT
CGCGGGATGCGCTATCGACTGATCGACGCGGCGCCTGAGACCCTGCTCGGCGAGACGATCTTGCTCTGCGAGCTCGAAGACGGCCATGTGGAGCTGTTCC
ACGGCTCACACCCCCTCGCCTGGCGGCGCAAGCGCGCCTACGAGACCCGCGGCGAGGATGACGGGCGCGCCCTCGTCTACTCCAAGGTCGGCGACCTCGC
TTGACGGTTAAGAGAGTGCGAACA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1713 bp570 aa921804+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MRDVFDMSRKELDRAAVLDKLADGRLTSHDAAALLDVSRRQVRRLQAAYRGGGAIALRSARRGAPSNRAYPSGFKDGVLSIIGAHYGDFGPTLAAEKLVE
RHGIAVSRETVRQWMTEAGYWIPRARRKTVHQLRPRRERFGELIQIDGSLHAWFEDRGPMCSLLVFIDDATGRLVDLHFCPSESTFDYMIAAKRYVGRYG
KPLAFYSDKHSIFRSAKESETGGANLTQFGRALSELNIDIICANSPQAKGRVERANGTLQDRLVKELRLAGVSDIAEANAFAERYRHVHNEKFAVAPRSS
ADAHRPVAAHEDLDHAFCVKSERVISRALSVQYDKVRFNLEPSAYAKRIAGRTVTICDYPDGRLVIEHGAVALPYTRFDTLQRVGRPEIVENKRLGGALA
WIAEQQAERDREQAPARSGNALKRRGQTGHGFATPKPQEPTPGKAALARAKDALKKTQPARAGTEHEWEHHIPGETRPAPDVRILNRGTVVVRKVSRMLT
VNHRGMRYRLIDAAPETLLGETILLCELEDGHVELFHGSHPLAWRRKRAYETRGEDDGRALVYSKVGDLA

 

Blast result :
Comments
ISOesp1 is 68% aa similar to ISAlba4.
References
1] Patricia Siguier (2020) Direct submission.
2] Mayali,X. (2018) Direct GenBank submission.