ISMaau1
- Family IS1202
- Group ISTde1
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP002360 | ND | Mahella australiensis | Mahella australiensis 50-1 BON |
DNA section
IS Length : 1753 bp
Ends
IR Length : 23/31
IRL : TGTTATTATTCTATGATATTGTCATAGTAAAATTATTCTGCGATAATGTC
IRR : TGTCAATAGTCAGCGAAAATGTCATAGTAAATGGCTGATATTTATTCAAC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CATATCAAAATCAA | TAAGACGTTTTGCACT | TTGCACGGTTTTTTAAACA | 16 |
DNA sequence
TGTTATTATTCTATGATATTGTCATAGTAAAATTATTCTGCGATAATGTCATTATGAGGAGAGAGGAACAGTATTGTATGACAGAGAGCGAAATGCAAAA
ACTTGTTGTTATTAATAAAGTCATCGATGGGACGTTAACCGCAAGTGAAGCTGCGCAGGTTTTAGACCTCAGTGTTCGTCAAATATTTAGACTTAAGAAG
GGGGTTAAAGAACAAGGTGCGTCTTTCGTTATTCATAAGAACAGAGGCCGTAAACCTGCTAATGCTTTAAGCGATGAGCTAGTAAACCATATCCTCACTT
TGAGGAAGGAAAAGTATTTTGATACGAATTTCTCTCATTTTAGAGATTTGCTTGAGGATGATAAGGGTATTATTCTTAGTAATTCCTCGGTTTATAGAAT
CCTTGATAATGCCGGTATTCAAAGCCCTAGAAAGCATAGACGCCCTCGTAAGATTCATGCTAGAAGGGAACGTATGCCTCAGGCTGGCATGTTGGTGCAA
ATCGATTGCACCTCTTTTGAATGGATTCCTTCTGTAGGTAATATGGCTCTCCACGGTGCCATAGACGATGCCACCGGTCAGGTCCTCGCGCTCTATTTTA
CTGAAAACGAGTGCATGAATGGCTATTTTGAGCTCATGCGTACCATCATTGGCCAATATGGTATCCCTATATCTCTATATGCCGATAAGCATACTATATT
TGCTTCTCCTAATAAGGGTAAAATCTCTATCGAGGAGCAGCTTGAGGGTAAAGTGGTAAATGAAACCCAGTTCCAAATGGCTATGAGTACATTGGGTATA
TCTATCATTAATGCCAGGTCCCCTCAGGCTAAGGGCCGCGTAGAGAGGCTATGGAATACTTTGCAGGATAGGCTCAGGGCAGAATTGAGGATTTATGGCA
TTGATTCTATGGAAAAGGCCAATGAGTTTTTGCCTAAGTTCCTGGAGAGATATAATAAAAGGTTCGCCATAGAGCCTCAAGATCCCGAGCCTGCTTTTAG
AGAATTACCGCCGGATATCGACTTAGATAATATACTTTGTGTTAAGTTATCTAGAAAAGTTGATAATGGCGGCGTATTTTCTCTACACAGCCAATATTAT
CAAGTTGTATGTGATGATGGCAAAACCGTTGCACCTATCGTTCCTAGAGCTAAGATAACGGTTCTTACCAGCCCTAGGATAGGTATACGGGTGCAGTATG
GCAATAATATATATGCTGTGAAAAAGCTCGATGAACCGCCTAAGAAAGCTCAGAAAGCTAATAAGGCAAGTTCATCGAGCACAGCTAAGCCTTATAAGCC
TTCTCCCACTCATCCTTGGAAACAAGGTTGGCAGAAGGCGCCATCATATTGGTATGAGGAATCAGACAGAGAGATTTTAGAGGCTCTGTATAATTCCTCA
CGCGCCTGGCACTAGCCAGTATTAAGGCTTACAGCCTAATTATATAATAGCTGCGAAATGAACGTGCGTCAAGGGCAAGCGGAGCTTGTTTATTTTACCC
TTTACGCACGGGAATGGAGCAGCTAGAATTTAGCAAAGCAGTAAGCCTTAAGATAGTATTATCTTTTTTGCTCATCTGGTGGTAATATATGTTCTCATAT
CATATTAATGTAAGTTGCTAAAGTTATATAACCAGCTTACTGTAATATAATCTATATTTAATGTTCCAATTATAGTAAATCCATACATCGCTATGAAATT
TTCGTTGAATAAATATCAGCCATTTACTATGACATTTTCGCTGACTATTGACA
ACTTGTTGTTATTAATAAAGTCATCGATGGGACGTTAACCGCAAGTGAAGCTGCGCAGGTTTTAGACCTCAGTGTTCGTCAAATATTTAGACTTAAGAAG
GGGGTTAAAGAACAAGGTGCGTCTTTCGTTATTCATAAGAACAGAGGCCGTAAACCTGCTAATGCTTTAAGCGATGAGCTAGTAAACCATATCCTCACTT
TGAGGAAGGAAAAGTATTTTGATACGAATTTCTCTCATTTTAGAGATTTGCTTGAGGATGATAAGGGTATTATTCTTAGTAATTCCTCGGTTTATAGAAT
CCTTGATAATGCCGGTATTCAAAGCCCTAGAAAGCATAGACGCCCTCGTAAGATTCATGCTAGAAGGGAACGTATGCCTCAGGCTGGCATGTTGGTGCAA
ATCGATTGCACCTCTTTTGAATGGATTCCTTCTGTAGGTAATATGGCTCTCCACGGTGCCATAGACGATGCCACCGGTCAGGTCCTCGCGCTCTATTTTA
CTGAAAACGAGTGCATGAATGGCTATTTTGAGCTCATGCGTACCATCATTGGCCAATATGGTATCCCTATATCTCTATATGCCGATAAGCATACTATATT
TGCTTCTCCTAATAAGGGTAAAATCTCTATCGAGGAGCAGCTTGAGGGTAAAGTGGTAAATGAAACCCAGTTCCAAATGGCTATGAGTACATTGGGTATA
TCTATCATTAATGCCAGGTCCCCTCAGGCTAAGGGCCGCGTAGAGAGGCTATGGAATACTTTGCAGGATAGGCTCAGGGCAGAATTGAGGATTTATGGCA
TTGATTCTATGGAAAAGGCCAATGAGTTTTTGCCTAAGTTCCTGGAGAGATATAATAAAAGGTTCGCCATAGAGCCTCAAGATCCCGAGCCTGCTTTTAG
AGAATTACCGCCGGATATCGACTTAGATAATATACTTTGTGTTAAGTTATCTAGAAAAGTTGATAATGGCGGCGTATTTTCTCTACACAGCCAATATTAT
CAAGTTGTATGTGATGATGGCAAAACCGTTGCACCTATCGTTCCTAGAGCTAAGATAACGGTTCTTACCAGCCCTAGGATAGGTATACGGGTGCAGTATG
GCAATAATATATATGCTGTGAAAAAGCTCGATGAACCGCCTAAGAAAGCTCAGAAAGCTAATAAGGCAAGTTCATCGAGCACAGCTAAGCCTTATAAGCC
TTCTCCCACTCATCCTTGGAAACAAGGTTGGCAGAAGGCGCCATCATATTGGTATGAGGAATCAGACAGAGAGATTTTAGAGGCTCTGTATAATTCCTCA
CGCGCCTGGCACTAGCCAGTATTAAGGCTTACAGCCTAATTATATAATAGCTGCGAAATGAACGTGCGTCAAGGGCAAGCGGAGCTTGTTTATTTTACCC
TTTACGCACGGGAATGGAGCAGCTAGAATTTAGCAAAGCAGTAAGCCTTAAGATAGTATTATCTTTTTTGCTCATCTGGTGGTAATATATGTTCTCATAT
CATATTAATGTAAGTTGCTAAAGTTATATAACCAGCTTACTGTAATATAATCTATATTTAATGTTCCAATTATAGTAAATCCATACATCGCTATGAAATT
TTCGTTGAATAAATATCAGCCATTTACTATGACATTTTCGCTGACTATTGACA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1338 bp | 445 aa | 78 | 1415 | + | No |
Chemistry : DDE
ORF sequence :
MTESEMQKLVVINKVIDGTLTASEAAQVLDLSVRQIFRLKKGVKEQGASFVIHKNRGRKPANALSDELVNHILTLRKEKYFDTNFSHFRDLLEDDKGIIL
SNSSVYRILDNAGIQSPRKHRRPRKIHARRERMPQAGMLVQIDCTSFEWIPSVGNMALHGAIDDATGQVLALYFTENECMNGYFELMRTIIGQYGIPISL
YADKHTIFASPNKGKISIEEQLEGKVVNETQFQMAMSTLGISIINARSPQAKGRVERLWNTLQDRLRAELRIYGIDSMEKANEFLPKFLERYNKRFAIEP
QDPEPAFRELPPDIDLDNILCVKLSRKVDNGGVFSLHSQYYQVVCDDGKTVAPIVPRAKITVLTSPRIGIRVQYGNNIYAVKKLDEPPKKAQKANKASSS
STAKPYKPSPTHPWKQGWQKAPSYWYEESDREILEALYNSSRAWH
SNSSVYRILDNAGIQSPRKHRRPRKIHARRERMPQAGMLVQIDCTSFEWIPSVGNMALHGAIDDATGQVLALYFTENECMNGYFELMRTIIGQYGIPISL
YADKHTIFASPNKGKISIEEQLEGKVVNETQFQMAMSTLGISIINARSPQAKGRVERLWNTLQDRLRAELRIYGIDSMEKANEFLPKFLERYNKRFAIEP
QDPEPAFRELPPDIDLDNILCVKLSRKVDNGGVFSLHSQYYQVVCDDGKTVAPIVPRAKITVLTSPRIGIRVQYGNNIYAVKKLDEPPKKAQKANKASSS
STAKPYKPSPTHPWKQGWQKAPSYWYEESDREILEALYNSSRAWH
Blast result :
Comments
ISMaau1 is 68% aa similar to ISSsac1.
References
1] Patricia Siguier (2020) Direct submission.
2] Lucas,S., Copeland,A., Lapidus,A., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Pagani,I., Ivanova,N., Teshima,H., Brettin,T., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Spring,S., Pukall,R., Steenblock,K., Schneider,S., Klenk,H.-P. and Eisen,J.A. (2010) Direct GenBank submission.
3] Sikorski,J., Teshima,H., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Huntemann,M., Mavromatis,K., Ovchinikova,G., Pati,A., Tapia,R., Han,C., Goodwin,L., Chen,A., Palaniappan,K., Land,M., Hauser,L., Ngatchou-Djao,O.D., Rohde,M., Pukall,R., Spring,S., Abt,B., Goker,M., Detter,J.C., Woyke,T., Bristow,J., Markowitz,V., Hugenholtz,P., Eisen,J.A., Kyrpides,N.C., Klenk,H.P. and Lapidus,A. (2011) Stand Genomic Sci 4 (3), 331-341.
2] Lucas,S., Copeland,A., Lapidus,A., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Pagani,I., Ivanova,N., Teshima,H., Brettin,T., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Spring,S., Pukall,R., Steenblock,K., Schneider,S., Klenk,H.-P. and Eisen,J.A. (2010) Direct GenBank submission.
3] Sikorski,J., Teshima,H., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Huntemann,M., Mavromatis,K., Ovchinikova,G., Pati,A., Tapia,R., Han,C., Goodwin,L., Chen,A., Palaniappan,K., Land,M., Hauser,L., Ngatchou-Djao,O.D., Rohde,M., Pukall,R., Spring,S., Abt,B., Goker,M., Detter,J.C., Woyke,T., Bristow,J., Markowitz,V., Hugenholtz,P., Eisen,J.A., Kyrpides,N.C., Klenk,H.P. and Lapidus,A. (2011) Stand Genomic Sci 4 (3), 331-341.