ISMasa2
- Family IS1182
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP017715 | ND | Marinobacter salinus | Marinobacter salinus Hb8 |
DNA section
IS Length : 1831 bp
Ends
IR Length : 17/18
IRL : GAGGCTGTAGAAAAACCCCGAAATCTCCACCTCGGTTTGGTAGGATCAGG
IRR : GAGGCTCTAGAAAAACCCGATTTCGAGTCGTTCCCAGCGCCTGGTTCTTA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CGCATGCTGGCTGGC | GTT | AGGTAATCGTGATG | 3 |
DNA sequence
GAGGCTGTAGAAAAACCCCGAAATCTCCACCTCGGTTTGGTAGGATCAGGCAAACAGACAAGGAGTCGTCGGCATGCCCCGCTTCAAGCATTACAACTAC
GACCAGGATGCCATGGTCGTGATCAACTACCAGGAACAGCTTCAACCCGGCACCTTTGAACACGCAGTGCACTATCTGATCGAACACAAGCTGGACCTGT
CAGTTTTCCATCCAAAATACCGCAACGAAGACACCGGCCGCTTAGCCTACGATCCGGCCATCCTGCTGAAGATCATCCTGTTTGCCTACTCCAAAGGCAT
CACCTCCAGTCGCGAGATGCAGTGGTGCTGCGAGACCAACATCATCTTCAAGGCCCTGTCCTGCGACACTGTTCCGCACTTCACCACGTTGGCCAAGTTC
GTCAGCAGCCACTCGGATGAGATCGAAGAGCTGTTCGAGCAGGTATTGTTGGTCTGCCACGACCAGGGCCTGCTGGGCAACGAACTCTTCGCCATCGACG
GCTGCAAGATGTCGTCGAATGCGGCCAAAGAATGGTCCGGCACCTTTAAGGAACTGGAAGAGAAACGAACCAAGCTGCGACGCCTGGTTCGCCATCACCT
CAAGGCCCATTACGAGCGGGACGAGGCAGAGACTGAAGCGGAACTGGACCGGGACATCCGACGAGCCAAGACCATCCTGTCCCTGGATGAGGCCGCCAGG
AAAGTCGACCGCTTCCTAAAGACGAACCGCCCAAGGATGGGCCGGGGGAAACGGAACAAGGAAGTGAAGAGCAACATCACCGATAACGAAAGCGCCAAGA
TGACCACCAGCAAGGGCACGATCCAGGGCTATAACGGCGTGGCCACGGTGGACAAGAAACACCAGATCATCATCGACGCCCAGGCCTTTGGCGAAGGCCA
GGAACACCACACCCTGCAACCGGTGCTGGAGAGCGTGGAAACCCGCTTCAAGAAGCTGGGCATCGCCGACAGCATCTACCAGCAAGGCATCATTGTTACC
GCCGACACCGGCTTCGCCAACGAAGCGAACATGAAATACCTGCATGAACGGCAGATCAATGGCTACGTGCCGGACAACAAATTCCGCAGTCGCGACCCGA
AGTTCCAGAACCAGAAAGACAAGTACGGCAAGCGTCACCAGAACCAGCCAACCACGGGTTGGAAAGACATCATTCCGGCCAGTGAATTCCAGTTCGATCC
GGTCAACCTGACGTGCATCTGCCCGACTGGCCAAGAGCTTACCTACCGGGGCCAACGGGAAGCGGAGAATGGCAATATCCGGGTGCACTTCGAAGGTCGA
TTGCTGCAATGTCGGCACTGTCCCAAGAAGCACCAATGCATGCAGAACCCTGCATCCGCTAACCACCGAAATGGGTCTGGCCGACAGGTGTCGTTCACCA
TTGAGAACAAGCGCTTGCCCAACTACACGGACTGGATGAAACACCGTGTCGACAGCCGTCAGGGCAAAGAGATCTACAGCCACCGCATGTCGGTGGTGGA
ACCGGTGTTCGGCAACATTGGCACGAATAAGGGGCTCAATCGCTTCAGTTTGCGGGGCAAAAAGAAGGTGCAGGGCCAGTGGCAGCTATACTGCCTGGTG
CACAATATTGAGAAACTGGCGAATTACGGGCGGTTGGCGGCATGAAACAGGGATCAGAAGGCGGGAAATATGGTCCCTGGATGCCAGCAATACCGGCACT
GGAAGCGGCAAAGACCCGAAACGACTCGCTGAACATCGAAAGTGGAATCATCAGTCAGTTAATGGCCGCGGCAAACAATTTTAAGAACCAGGCGCTGGGA
ACGACTCGAAATCGGGTTTTTCTAGAGCCTC
GACCAGGATGCCATGGTCGTGATCAACTACCAGGAACAGCTTCAACCCGGCACCTTTGAACACGCAGTGCACTATCTGATCGAACACAAGCTGGACCTGT
CAGTTTTCCATCCAAAATACCGCAACGAAGACACCGGCCGCTTAGCCTACGATCCGGCCATCCTGCTGAAGATCATCCTGTTTGCCTACTCCAAAGGCAT
CACCTCCAGTCGCGAGATGCAGTGGTGCTGCGAGACCAACATCATCTTCAAGGCCCTGTCCTGCGACACTGTTCCGCACTTCACCACGTTGGCCAAGTTC
GTCAGCAGCCACTCGGATGAGATCGAAGAGCTGTTCGAGCAGGTATTGTTGGTCTGCCACGACCAGGGCCTGCTGGGCAACGAACTCTTCGCCATCGACG
GCTGCAAGATGTCGTCGAATGCGGCCAAAGAATGGTCCGGCACCTTTAAGGAACTGGAAGAGAAACGAACCAAGCTGCGACGCCTGGTTCGCCATCACCT
CAAGGCCCATTACGAGCGGGACGAGGCAGAGACTGAAGCGGAACTGGACCGGGACATCCGACGAGCCAAGACCATCCTGTCCCTGGATGAGGCCGCCAGG
AAAGTCGACCGCTTCCTAAAGACGAACCGCCCAAGGATGGGCCGGGGGAAACGGAACAAGGAAGTGAAGAGCAACATCACCGATAACGAAAGCGCCAAGA
TGACCACCAGCAAGGGCACGATCCAGGGCTATAACGGCGTGGCCACGGTGGACAAGAAACACCAGATCATCATCGACGCCCAGGCCTTTGGCGAAGGCCA
GGAACACCACACCCTGCAACCGGTGCTGGAGAGCGTGGAAACCCGCTTCAAGAAGCTGGGCATCGCCGACAGCATCTACCAGCAAGGCATCATTGTTACC
GCCGACACCGGCTTCGCCAACGAAGCGAACATGAAATACCTGCATGAACGGCAGATCAATGGCTACGTGCCGGACAACAAATTCCGCAGTCGCGACCCGA
AGTTCCAGAACCAGAAAGACAAGTACGGCAAGCGTCACCAGAACCAGCCAACCACGGGTTGGAAAGACATCATTCCGGCCAGTGAATTCCAGTTCGATCC
GGTCAACCTGACGTGCATCTGCCCGACTGGCCAAGAGCTTACCTACCGGGGCCAACGGGAAGCGGAGAATGGCAATATCCGGGTGCACTTCGAAGGTCGA
TTGCTGCAATGTCGGCACTGTCCCAAGAAGCACCAATGCATGCAGAACCCTGCATCCGCTAACCACCGAAATGGGTCTGGCCGACAGGTGTCGTTCACCA
TTGAGAACAAGCGCTTGCCCAACTACACGGACTGGATGAAACACCGTGTCGACAGCCGTCAGGGCAAAGAGATCTACAGCCACCGCATGTCGGTGGTGGA
ACCGGTGTTCGGCAACATTGGCACGAATAAGGGGCTCAATCGCTTCAGTTTGCGGGGCAAAAAGAAGGTGCAGGGCCAGTGGCAGCTATACTGCCTGGTG
CACAATATTGAGAAACTGGCGAATTACGGGCGGTTGGCGGCATGAAACAGGGATCAGAAGGCGGGAAATATGGTCCCTGGATGCCAGCAATACCGGCACT
GGAAGCGGCAAAGACCCGAAACGACTCGCTGAACATCGAAAGTGGAATCATCAGTCAGTTAATGGCCGCGGCAAACAATTTTAAGAACCAGGCGCTGGGA
ACGACTCGAAATCGGGTTTTTCTAGAGCCTC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1572 bp | 523 aa | 74 | 1645 | + | No |
Chemistry : DDE
ORF sequence :
MPRFKHYNYDQDAMVVINYQEQLQPGTFEHAVHYLIEHKLDLSVFHPKYRNEDTGRLAYDPAILLKIILFAYSKGITSSREMQWCCETNIIFKALSCDTV
PHFTTLAKFVSSHSDEIEELFEQVLLVCHDQGLLGNELFAIDGCKMSSNAAKEWSGTFKELEEKRTKLRRLVRHHLKAHYERDEAETEAELDRDIRRAKT
ILSLDEAARKVDRFLKTNRPRMGRGKRNKEVKSNITDNESAKMTTSKGTIQGYNGVATVDKKHQIIIDAQAFGEGQEHHTLQPVLESVETRFKKLGIADS
IYQQGIIVTADTGFANEANMKYLHERQINGYVPDNKFRSRDPKFQNQKDKYGKRHQNQPTTGWKDIIPASEFQFDPVNLTCICPTGQELTYRGQREAENG
NIRVHFEGRLLQCRHCPKKHQCMQNPASANHRNGSGRQVSFTIENKRLPNYTDWMKHRVDSRQGKEIYSHRMSVVEPVFGNIGTNKGLNRFSLRGKKKVQ
GQWQLYCLVHNIEKLANYGRLAA
PHFTTLAKFVSSHSDEIEELFEQVLLVCHDQGLLGNELFAIDGCKMSSNAAKEWSGTFKELEEKRTKLRRLVRHHLKAHYERDEAETEAELDRDIRRAKT
ILSLDEAARKVDRFLKTNRPRMGRGKRNKEVKSNITDNESAKMTTSKGTIQGYNGVATVDKKHQIIIDAQAFGEGQEHHTLQPVLESVETRFKKLGIADS
IYQQGIIVTADTGFANEANMKYLHERQINGYVPDNKFRSRDPKFQNQKDKYGKRHQNQPTTGWKDIIPASEFQFDPVNLTCICPTGQELTYRGQREAENG
NIRVHFEGRLLQCRHCPKKHQCMQNPASANHRNGSGRQVSFTIENKRLPNYTDWMKHRVDSRQGKEIYSHRMSVVEPVFGNIGTNKGLNRFSLRGKKKVQ
GQWQLYCLVHNIEKLANYGRLAA
Blast result :
Comments
ISMasa1 is 96% aa similar to ISMasa1.
Identified within an integron (same integron contains ISMasa1) and shows 86% identity to ISMasa1
Identified within an integron (same integron contains ISMasa1) and shows 86% identity to ISMasa1
References
1] Sarah Sonbol (2021) Direct submission.
2] Park,S.-J. (2016) Direct GenBank submission.
2] Park,S.-J. (2016) Direct GenBank submission.