ISMae20
- Family IS607
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP020664 | ND | Microcystis sp. | Microcystis aeruginosa NIES-843 Microcystis sp. MC19 |
DNA section
IS Length : 1896 bp
Ends
IR Length : 0
IRL : GTATTGTAAAGTTTTGTAAAAAATATATGCAAATGACTGCAAACAACTGC
IRR : ATAGTTACTAATTCTGTACGCAAATATTGCATCTAGAATTAGCTTTGTAC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CCCTTCCTCTTAA | TACCGGAAGGATT | 0 |
DNA sequence
GTATTGTAAAGTTTTGTAAAAAATATATGCAAATGACTGCAAACAACTGCTAATATGGTTAGTGCAAGTTTACATTGCAGTTCACATGAAACTATCAGAT
TATGCTAAGAAAAAAGGGATCAGTTATGACACTGCTTGGAGAATGTGGAATCGAGGGCAGTTACAAGGAGAACGTCTTCCTACAGGAACAATTATTATTT
TTGAAGATGACCGTTCTTGCGGTGAAAATAAAGTAGCTATTTATGCGCGAGTTTCTAGTTCAGAAAATCAATCTAACTTAGAGACTCAGGCAAAAAGATT
GGAAGCTTATTGTATTGCGAAAGGCTATCAAATTGTTCGAGTAGTTAAAGAAGTAGGAAGTGGAGTCAATGATCATCGAAAGCTATTATTAAAACTTCTA
GAACAAACTGATTATAATTTGATTGTCGTAGAACATAAAGATCGTTTAAGCAGAGTAGGGTTTAATTATCTGAAAGTTCTTTTAACTCAAACAAATAGAG
ATCTAGAGGTCGTTAATCTAGCAGAAGAAAGAAAAGACGATTTAATGGAAGACTTCGTGAGCATAATTACCTCATTTTGCGCTCGATTATACTCATTAAG
ACGACGAAATAGAAAGACAGAATGTTTAATTAAATGCCTTGAGGAGAATGATGAAATTAGTTCAAAAACATCTAATTAAATTTAATCACAAAAATTATTC
AGTAATTGATAAATTAGGATTTTTATCGAAGAATCTGTATAATTGTGCTGTTTATTTAAACCGTCAAGTTTTCTTTTCACATCAACCATTTTTAACAATG
ACTGAGTTACATCATGCCTTAAAAATGAGTCCAGATTATCAAGCCTTACCCGCCAAAGTAAGTCAGTTAGTATTAAAGCAAGTAGAAAAAACCTTTAAAT
CCTACCAAAAAGCGAAAGAACAATACAAAAAATCGCCAGATAAATTTACAGGAGAGCCTAAGTTGCCAAGATACAAAGACAAGGAAAAAGGTAGAAACGT
TTTAACTTATAACTATCAAGCCATTTCTAAAAAAGCGTTGAAGCAAGGTTTAATCAAGCTATCAGGGACTAATTTAGAATTTAAAACTAATTTAAAGGAA
GTTTTAGAGGTCAGGATTATTCCTAAATTGGGTGCTTATTGTTTAGAGATTGTCTATGAACAACCATCCTCATCAAGTCAAGAGGGAGAAAGATATGCTT
TTATCGATTTAGGCTTAAATAACCTAGCTGCTGTTACCTCTAATATTCCCGAATTTCAGCCAACTTTAGTATGTGGAAAAGCCTTAAAATCCTGCAATCA
AAAGTACAACAAGACACTAGCTAAACTCAAATCGGAATTACCCAGTCTACAGAAGACCAGTAAAAGAATACAAGGTTTAACTTTAAAGCGTAATTGCCAG
GTGGATTATTACCTCCACACCGCTAGTAAATATATTATTGATAAATTACTAGCTCATCAAATTAACCTTTTAGTTATTGGTCATAATCAAGGCTGGAAAC
AAAACATTAATATTGGAGATAGAAATAACCAGTCGTTCGTAAATATTCCTCATTCAAGGTTGATCGAACAACTTACCTATAAAGCAAATTTAGTAGGAAT
AGAGGTCAAAACAACTAATGAAAGCTATACCTCTAAATGTAGTTTCTTAGACTTAGAGTCTATTCAAAAGCAAAAAAGCTATTTAGGCAAGAGAATTAAA
AGAGGACTATTCAGAAGCTCGTCGGGTTATTTCTATGGAGCAGATATTAATGGTTCCTTAAATATTGGAAGAAAGGTAGTCGGAGAGGCCGCCTTTAGCG
GGAATCCGATAGAGAGGTTCGTAGTTAACCCAGTACGGGTCAAAGCGTACAAAGCTAATTCTAGATGCAATATTTGCGTACAGAATTAGTAACTAT
TATGCTAAGAAAAAAGGGATCAGTTATGACACTGCTTGGAGAATGTGGAATCGAGGGCAGTTACAAGGAGAACGTCTTCCTACAGGAACAATTATTATTT
TTGAAGATGACCGTTCTTGCGGTGAAAATAAAGTAGCTATTTATGCGCGAGTTTCTAGTTCAGAAAATCAATCTAACTTAGAGACTCAGGCAAAAAGATT
GGAAGCTTATTGTATTGCGAAAGGCTATCAAATTGTTCGAGTAGTTAAAGAAGTAGGAAGTGGAGTCAATGATCATCGAAAGCTATTATTAAAACTTCTA
GAACAAACTGATTATAATTTGATTGTCGTAGAACATAAAGATCGTTTAAGCAGAGTAGGGTTTAATTATCTGAAAGTTCTTTTAACTCAAACAAATAGAG
ATCTAGAGGTCGTTAATCTAGCAGAAGAAAGAAAAGACGATTTAATGGAAGACTTCGTGAGCATAATTACCTCATTTTGCGCTCGATTATACTCATTAAG
ACGACGAAATAGAAAGACAGAATGTTTAATTAAATGCCTTGAGGAGAATGATGAAATTAGTTCAAAAACATCTAATTAAATTTAATCACAAAAATTATTC
AGTAATTGATAAATTAGGATTTTTATCGAAGAATCTGTATAATTGTGCTGTTTATTTAAACCGTCAAGTTTTCTTTTCACATCAACCATTTTTAACAATG
ACTGAGTTACATCATGCCTTAAAAATGAGTCCAGATTATCAAGCCTTACCCGCCAAAGTAAGTCAGTTAGTATTAAAGCAAGTAGAAAAAACCTTTAAAT
CCTACCAAAAAGCGAAAGAACAATACAAAAAATCGCCAGATAAATTTACAGGAGAGCCTAAGTTGCCAAGATACAAAGACAAGGAAAAAGGTAGAAACGT
TTTAACTTATAACTATCAAGCCATTTCTAAAAAAGCGTTGAAGCAAGGTTTAATCAAGCTATCAGGGACTAATTTAGAATTTAAAACTAATTTAAAGGAA
GTTTTAGAGGTCAGGATTATTCCTAAATTGGGTGCTTATTGTTTAGAGATTGTCTATGAACAACCATCCTCATCAAGTCAAGAGGGAGAAAGATATGCTT
TTATCGATTTAGGCTTAAATAACCTAGCTGCTGTTACCTCTAATATTCCCGAATTTCAGCCAACTTTAGTATGTGGAAAAGCCTTAAAATCCTGCAATCA
AAAGTACAACAAGACACTAGCTAAACTCAAATCGGAATTACCCAGTCTACAGAAGACCAGTAAAAGAATACAAGGTTTAACTTTAAAGCGTAATTGCCAG
GTGGATTATTACCTCCACACCGCTAGTAAATATATTATTGATAAATTACTAGCTCATCAAATTAACCTTTTAGTTATTGGTCATAATCAAGGCTGGAAAC
AAAACATTAATATTGGAGATAGAAATAACCAGTCGTTCGTAAATATTCCTCATTCAAGGTTGATCGAACAACTTACCTATAAAGCAAATTTAGTAGGAAT
AGAGGTCAAAACAACTAATGAAAGCTATACCTCTAAATGTAGTTTCTTAGACTTAGAGTCTATTCAAAAGCAAAAAAGCTATTTAGGCAAGAGAATTAAA
AGAGGACTATTCAGAAGCTCGTCGGGTTATTTCTATGGAGCAGATATTAATGGTTCCTTAAATATTGGAAGAAAGGTAGTCGGAGAGGCCGCCTTTAGCG
GGAATCCGATAGAGAGGTTCGTAGTTAACCCAGTACGGGTCAAAGCGTACAAAGCTAATTCTAGATGCAATATTTGCGTACAGAATTAGTAACTAT
Protein section
ORF number : 2
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
594 bp | 197 aa | 86 | 679 | + | No |
Chemistry : Serine
ORF sequence :
MKLSDYAKKKGISYDTAWRMWNRGQLQGERLPTGTIIIFEDDRSCGENKVAIYARVSSSENQSNLETQAKRLEAYCIAKGYQIVRVVKEVGSGVNDHRKL
LLKLLEQTDYNLIVVEHKDRLSRVGFNYLKVLLTQTNRDLEVVNLAEERKDDLMEDFVSIITSFCARLYSLRRRNRKTECLIKCLEENDEISSKTSN
LLKLLEQTDYNLIVVEHKDRLSRVGFNYLKVLLTQTNRDLEVVNLAEERKDDLMEDFVSIITSFCARLYSLRRRNRKTECLIKCLEENDEISSKTSN
Blast result :ORF 2
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1239 bp | 412 aa | 651 | 1889 | + | No |
AG : TnpB
ORF sequence :
MKLVQKHLIKFNHKNYSVIDKLGFLSKNLYNCAVYLNRQVFFSHQPFLTMTELHHALKMSPDYQALPAKVSQLVLKQVEKTFKSYQKAKEQYKKSPDKFT
GEPKLPRYKDKEKGRNVLTYNYQAISKKALKQGLIKLSGTNLEFKTNLKEVLEVRIIPKLGAYCLEIVYEQPSSSSQEGERYAFIDLGLNNLAAVTSNIP
EFQPTLVCGKALKSCNQKYNKTLAKLKSELPSLQKTSKRIQGLTLKRNCQVDYYLHTASKYIIDKLLAHQINLLVIGHNQGWKQNINIGDRNNQSFVNIP
HSRLIEQLTYKANLVGIEVKTTNESYTSKCSFLDLESIQKQKSYLGKRIKRGLFRSSSGYFYGADINGSLNIGRKVVGEAAFSGNPIERFVVNPVRVKAY
KANSRCNICVQN
GEPKLPRYKDKEKGRNVLTYNYQAISKKALKQGLIKLSGTNLEFKTNLKEVLEVRIIPKLGAYCLEIVYEQPSSSSQEGERYAFIDLGLNNLAAVTSNIP
EFQPTLVCGKALKSCNQKYNKTLAKLKSELPSLQKTSKRIQGLTLKRNCQVDYYLHTASKYIIDKLLAHQINLLVIGHNQGWKQNINIGDRNNQSFVNIP
HSRLIEQLTYKANLVGIEVKTTNESYTSKCSFLDLESIQKQKSYLGKRIKRGLFRSSSGYFYGADINGSLNIGRKVVGEAAFSGNPIERFVVNPVRVKAY
KANSRCNICVQN
Blast result :
Comments
ISMae20 is 78% aa similar to ISMae17.
References
1] ISfinder submission (2018)
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.
3] Chun,S.-J., Cui,Y., Ko,S.-R., Oh,H.-S., Srivastava,A., Jeong,H., Ahn,C.-Y. and Oh,H.-M. (2017) Direct GenBank submission.
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.
3] Chun,S.-J., Cui,Y., Ko,S.-R., Oh,H.-S., Srivastava,A., Jeong,H., Ahn,C.-Y. and Oh,H.-M. (2017) Direct GenBank submission.