ISMae17
- Family IS607
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_010296 | ND | Microcystis aeruginosa | Microcystis aeruginosa NIES-843 |
DNA section
IS Length : 1921 bp
Ends
IR Length : 0
IRL : GTATTGTAAAGTTTCAATACAAATATAGTCAGATATAGTCAAGCATGGTC
IRR : ATAGTTAGTAAAAGTATAGTCAAATATAGACAGACTGAATTCCATTTCAG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ACTCAACGGATTTA | TAATATGTCCAATTT | 0 |
DNA sequence
GTATTGTAAAGTTTCAATACAAATATAGTCAGATATAGTCAAGCATGGTCATATATAGATATGAAACTATCAGACTATGCAAAAAAAACAGGAATAAGTT
ATCGAACGGCTTGGAGGTGGTGGAAACAAGGGAATTTAACAGGTTATCAATTGCCTTCTGGTACAATTATCATAACGGATGACAACCATTCAAAACCCGA
CTTGATAGCCTGCATTTATGCAAGAGTTTCCAGTGCCGAAAATAAAGACAATCTAGATAGACAAGCTGACCGATTAAAAGATTATGCTGTTGCCAGAGGC
TACAAAATCTACAAAGTTGTCAAAGAAGTAGGCAGTGGATTAAACGATAATCGCCAACAATTAGCCAAAATTCTAGTTGACCCCAATTATAATGTTTTAA
TTGTTGAACACAAAGACCGTCTAGCCAGATTTGGGACTAATTATCTAGAAATCTTGTTAAAAGAACTAGATAAAAAAGTGGAGATTGTCAATCAAAGTGA
GGATAATCAGGATGAGTTGATGTCAGATTTAATAGCCATTATAACCTCTTTTTGTTCTCGAATTTACGGATTAAGAAGGTCGAAAAGAAAGACAGAAAAG
ATTATAGCTGAGTTAAAAGACAACGGATAATAATGTTAGTAGCAGAAAGACACATTATCAAGAAAGGACATAGATTTTGGGCTGAGATAGATAATTTATC
TTGGCAGTCTAAAAATCTCTACAACTCAGCCAATTATTTAATCCGACAAAACTTCATTTATGGTCATGGCTATTTGACCTATAATCAGATGGCCTCTCTG
AGGTCAAAGACAGAACAGTATCAAGCTTTACCCGCTAAAGTTTCCCAACAAGTTTTGAGAGGATTAGACAAAAACTGGAAATCATTTTTTGCCGCTTCAT
CGGAGTTTAAAAGTCACCCCGATAAATTTCTGGTCAAACCCAAAATCCCTAGCTATAAGGAGCCAAAAAAAGGACGAAATCTCTTAGTTTACACGATTCA
AGCTATAAGCAAAGTAGGTCTTAGGCAAGGGTTAGTCAAACTATCAGGTACTTCAATTGCCTTGCCGACGAGAGTAGCAGAGCGCATAGCAGAAGTCAGA
ATAGTTCCTAAATGTGATTGTTATGTAATCGAGGTAATTTATGAGAAAACTGAACAGTTCTTAGCTCCTAATGAAAAGATAGCTGCGCTAGATTTAGGCA
TAGATAATTTGATGGCTGTAACTTCAAATCAACCGGACTTTATCCCTTTGTTGATTAATGGCAGACCGTTAAAAAGCCTGAATCAATTTTATAACCAACG
TCGGGCTAAGTTACAATCTCTGTTAAAAGGCAATCGTCAAAGTTCCCAGAGGATTCGCCGTTTAACTCGCTGTCGTAATCAGAAAGTAGATGATTATCTT
CATCAGGCTAGTCGTTATTTAGTCAATCTCTTAGTTGACCAAGAGATAACAACTTTAGTAATTGGGAAAAATGACGGTTGGAAACAAGAAGTAAACTTAG
GAAAAGTCAACAATCAAAAATTTGTGACCATCCCTCATGCTCGATTAATTGAGATGATTAGTTATAAATGTCAATTAGAAGGAATCTCTGTGATTCTTCA
AGAAGAATCCTATACCTCAGCTTCTAATTTTTTGAATGACGATCCTCTCCCCGTTTATGGACAGATAACTGAAAAGCCAGTGTTTTCAGGAAACTGAATT
TTACGAGGGTTATATCGTACAGATAAGGGGATTCTGGTTCAATCTGATGTCATGGGTTCCTACAATATTTTACGAAAAGCATTCCCAAATGCGTTTAACT
GCTATGGGATAGAGAGGTGCGTAGTTCACCCAAGGAGAATCAATCTCTCGAAGTAAAAGTGAAGGGAATTTCTGAAATGGAATTCAGTCTGTCTATATTT
GACTATACTTTTACTAACTAT
ATCGAACGGCTTGGAGGTGGTGGAAACAAGGGAATTTAACAGGTTATCAATTGCCTTCTGGTACAATTATCATAACGGATGACAACCATTCAAAACCCGA
CTTGATAGCCTGCATTTATGCAAGAGTTTCCAGTGCCGAAAATAAAGACAATCTAGATAGACAAGCTGACCGATTAAAAGATTATGCTGTTGCCAGAGGC
TACAAAATCTACAAAGTTGTCAAAGAAGTAGGCAGTGGATTAAACGATAATCGCCAACAATTAGCCAAAATTCTAGTTGACCCCAATTATAATGTTTTAA
TTGTTGAACACAAAGACCGTCTAGCCAGATTTGGGACTAATTATCTAGAAATCTTGTTAAAAGAACTAGATAAAAAAGTGGAGATTGTCAATCAAAGTGA
GGATAATCAGGATGAGTTGATGTCAGATTTAATAGCCATTATAACCTCTTTTTGTTCTCGAATTTACGGATTAAGAAGGTCGAAAAGAAAGACAGAAAAG
ATTATAGCTGAGTTAAAAGACAACGGATAATAATGTTAGTAGCAGAAAGACACATTATCAAGAAAGGACATAGATTTTGGGCTGAGATAGATAATTTATC
TTGGCAGTCTAAAAATCTCTACAACTCAGCCAATTATTTAATCCGACAAAACTTCATTTATGGTCATGGCTATTTGACCTATAATCAGATGGCCTCTCTG
AGGTCAAAGACAGAACAGTATCAAGCTTTACCCGCTAAAGTTTCCCAACAAGTTTTGAGAGGATTAGACAAAAACTGGAAATCATTTTTTGCCGCTTCAT
CGGAGTTTAAAAGTCACCCCGATAAATTTCTGGTCAAACCCAAAATCCCTAGCTATAAGGAGCCAAAAAAAGGACGAAATCTCTTAGTTTACACGATTCA
AGCTATAAGCAAAGTAGGTCTTAGGCAAGGGTTAGTCAAACTATCAGGTACTTCAATTGCCTTGCCGACGAGAGTAGCAGAGCGCATAGCAGAAGTCAGA
ATAGTTCCTAAATGTGATTGTTATGTAATCGAGGTAATTTATGAGAAAACTGAACAGTTCTTAGCTCCTAATGAAAAGATAGCTGCGCTAGATTTAGGCA
TAGATAATTTGATGGCTGTAACTTCAAATCAACCGGACTTTATCCCTTTGTTGATTAATGGCAGACCGTTAAAAAGCCTGAATCAATTTTATAACCAACG
TCGGGCTAAGTTACAATCTCTGTTAAAAGGCAATCGTCAAAGTTCCCAGAGGATTCGCCGTTTAACTCGCTGTCGTAATCAGAAAGTAGATGATTATCTT
CATCAGGCTAGTCGTTATTTAGTCAATCTCTTAGTTGACCAAGAGATAACAACTTTAGTAATTGGGAAAAATGACGGTTGGAAACAAGAAGTAAACTTAG
GAAAAGTCAACAATCAAAAATTTGTGACCATCCCTCATGCTCGATTAATTGAGATGATTAGTTATAAATGTCAATTAGAAGGAATCTCTGTGATTCTTCA
AGAAGAATCCTATACCTCAGCTTCTAATTTTTTGAATGACGATCCTCTCCCCGTTTATGGACAGATAACTGAAAAGCCAGTGTTTTCAGGAAACTGAATT
TTACGAGGGTTATATCGTACAGATAAGGGGATTCTGGTTCAATCTGATGTCATGGGTTCCTACAATATTTTACGAAAAGCATTCCCAAATGCGTTTAACT
GCTATGGGATAGAGAGGTGCGTAGTTCACCCAAGGAGAATCAATCTCTCGAAGTAAAAGTGAAGGGAATTTCTGAAATGGAATTCAGTCTGTCTATATTT
GACTATACTTTTACTAACTAT
Protein section
ORF number : 2
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
570 bp | 189 aa | 61 | 630 | + | No |
Chemistry : Serine
ORF sequence :
MKLSDYAKKTGISYRTAWRWWKQGNLTGYQLPSGTIIITDDNHSKPDLIACIYARVSSAENKDNLDRQADRLKDYAVARGYKIYKVVKEVGSGLNDNRQQ
LAKILVDPNYNVLIVEHKDRLARFGTNYLEILLKELDKKVEIVNQSEDNQDELMSDLIAIITSFCSRIYGLRRSKRKTEKIIAELKDNG
LAKILVDPNYNVLIVEHKDRLARFGTNYLEILLKELDKKVEIVNQSEDNQDELMSDLIAIITSFCSRIYGLRRSKRKTEKIIAELKDNG
Blast result :ORF 2
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1065 bp | 354 aa | 633 | 1697 | + | No |
AG : TnpB
ORF sequence :
MLVAERHIIKKGHRFWAEIDNLSWQSKNLYNSANYLIRQNFIYGHGYLTYNQMASLRSKTEQYQALPAKVSQQVLRGLDKNWKSFFAASSEFKSHPDKFL
VKPKIPSYKEPKKGRNLLVYTIQAISKVGLRQGLVKLSGTSIALPTRVAERIAEVRIVPKCDCYVIEVIYEKTEQFLAPNEKIAALDLGIDNLMAVTSNQ
PDFIPLLINGRPLKSLNQFYNQRRAKLQSLLKGNRQSSQRIRRLTRCRNQKVDDYLHQASRYLVNLLVDQEITTLVIGKNDGWKQEVNLGKVNNQKFVTI
PHARLIEMISYKCQLEGISVILQEESYTSASNFLNDDPLPVYGQITEKPVFSGN
VKPKIPSYKEPKKGRNLLVYTIQAISKVGLRQGLVKLSGTSIALPTRVAERIAEVRIVPKCDCYVIEVIYEKTEQFLAPNEKIAALDLGIDNLMAVTSNQ
PDFIPLLINGRPLKSLNQFYNQRRAKLQSLLKGNRQSSQRIRRLTRCRNQKVDDYLHQASRYLVNLLVDQEITTLVIGKNDGWKQEVNLGKVNNQKFVTI
PHARLIEMISYKCQLEGISVILQEESYTSASNFLNDDPLPVYGQITEKPVFSGN
Blast result :
Comments
ISMae17 is 75% (transposase) aa similar to ISAfe10.
References
1] ISfinder submission (2018)
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.