ISMae15
- Family IS200/IS605
- Group IS1341
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
AP009552 | ND | Microcystis aeruginosa | Microcystis aeruginosa NIES-843 |
DNA section
IS Length : 1635 bp
Ends
Left end : CGAAAATTTGGGTTAAAACCCCGTCGTTTTACGACGGCTTTTCCTGATTTTTAATGTAGCACTTAAGAACTTCCAGTGGCGCACCTCTCAGTTATCAGTT II struct. : Yes
Right end : AGCAGCATCTCGTGAAGCGTCAACCCAGCGGTCGGTCGTTCAATTAAGTTTGTTTGATCTGCCGGTCATCACCGTCCGGCCCCGGCGGTGAGGATGTCAA II struct. : Yes
Insertion site
Left flank | LE cleavage site | Right flank | RE cleavage site |
---|---|---|---|
AGTACCCAAC | TTAT | AATACAGAAG | TCAA |
DNA sequence
CGAAAATTTGGGTTAAAACCCCGTCGTTTTACGACGGCTTTTCCTGATTTTTAATGTAGCACTTAAGAACTTCCAGTGGCGCACCTCTCAGTTATCAGTT
ATCAGTTATCAGTTATCAGTGGGTAAGTTATCAGTTATCAGATGTGAGTTTTTAAGTGTGCAGTATTAAATAAGTAGTCGTGCAAAATTAATTTCCTAGT
GAAGATAGGCAAGAGACAAGAGACAAGAGGCAAGAGGTGGTTAGATATGTGTAATTAATTTTGCTTAGGTACTTAGAAGTTTCCTACTGTCTTTTTACTG
ATTACTGATCACTGATTACTAACCGACTTGGCATTATTGACAGACCTAGTTAGAATAGAGTACAGACACAAATATCTTAACCCAATGAAAGCGAGGTATC
AATACCGTATTTACCCAACAGACCAACAAAAGAGGCTTTTGTCTCAATTGTTCGGGTGTGTGCGCATTGTCTGGAACGATACCTTAGCTTACTGTCAAGA
ACTCTATCGACAAGGGGAGAAAAAGCCAAAATATACCGAGTTATCTAAAAGACTAACTCAAATTAAAAAGACGACAGAAAAAGTCTGGCTGACCGAGGTT
TCTTCTATCCCTTTACAACAGTCTTTGAGAGACTTAGAGACAGCCTATTCTAACTTTTTTGCATCTTGCAAGGGAGAGAGAAAAGGAAGAAAAGTAAAAC
CTCCTAAATTTAAGAAGCGTAAATCTAAACAATCAGCGAGATTTACTGACAATGGTTTTACCATCAATCAATATCACGTTACTTTAGCCAAAATCGGTGA
TTTAAGAATCGTTTGGAGTCGCCCATTACCCTCTAAACCTTCTAGCGTTACCGTGATTAAAGATGCAGCAGATCGCTATTTTCTCAGCTTTGTTGTCGAG
ATTCAGCCCGAAATACTTCCTAATAACGGGGAGTCCGTGGGAATCGATCTAGGGATTGCTACTTTTGCGACTCTCTCAACAGGGGAAAAGATAGACGCAC
CGAAACCGTTAAAGAAACAATTAAAACGGCTAAGAAAGGCACAGAAAAACCTTTCTAGAAAGCAAAAAGGAAGTAACCGACGGGAAAAAGCTAGGAAACG
AGTAGCTAAAATCCACGCAAAGATTAAGGACACTCGTACTGATTTCTTGCAGAAACTATCCACTAGAGTTGTTCGTGAAAATCAAACGATAATTTTAGAG
GATTTAAACACATCGGGAATGGTTAAAAATCGTAAGTTATCCCGTGCCATATCAGACTTAGGATGGCGTTCTTTCCGAGATATGCTATCGGCAAAATCTG
ATAAATATGGGCGTAATTTTCGGATAATTTCCCGATGGGAGCCAACGTCTCAGCGATGTTCCTGTTGTGGGAATATTGGCGGGAAAAAAGCGTTAAATAT
CCGTGAGTGGGAATGTCTTTTCTGTGGGACTTTTCATGATCGAGACGTGAACGCCGCAATTAATATCAAGGTCGCCGGTGGGCAATCGGAGACTTTAAAC
GGGCGTGGAGGACAGCATAAGACTTCTGTTAAAGAAGCAGCATCTCGTGAAGCGTCAACCCAGCGGTCGGTCGTTCAATTAAGTTTGTTTGATCTGCCGG
TCATCACCGTCCGGCCCCGGCGGTGAGGATGTCAA
ATCAGTTATCAGTTATCAGTGGGTAAGTTATCAGTTATCAGATGTGAGTTTTTAAGTGTGCAGTATTAAATAAGTAGTCGTGCAAAATTAATTTCCTAGT
GAAGATAGGCAAGAGACAAGAGACAAGAGGCAAGAGGTGGTTAGATATGTGTAATTAATTTTGCTTAGGTACTTAGAAGTTTCCTACTGTCTTTTTACTG
ATTACTGATCACTGATTACTAACCGACTTGGCATTATTGACAGACCTAGTTAGAATAGAGTACAGACACAAATATCTTAACCCAATGAAAGCGAGGTATC
AATACCGTATTTACCCAACAGACCAACAAAAGAGGCTTTTGTCTCAATTGTTCGGGTGTGTGCGCATTGTCTGGAACGATACCTTAGCTTACTGTCAAGA
ACTCTATCGACAAGGGGAGAAAAAGCCAAAATATACCGAGTTATCTAAAAGACTAACTCAAATTAAAAAGACGACAGAAAAAGTCTGGCTGACCGAGGTT
TCTTCTATCCCTTTACAACAGTCTTTGAGAGACTTAGAGACAGCCTATTCTAACTTTTTTGCATCTTGCAAGGGAGAGAGAAAAGGAAGAAAAGTAAAAC
CTCCTAAATTTAAGAAGCGTAAATCTAAACAATCAGCGAGATTTACTGACAATGGTTTTACCATCAATCAATATCACGTTACTTTAGCCAAAATCGGTGA
TTTAAGAATCGTTTGGAGTCGCCCATTACCCTCTAAACCTTCTAGCGTTACCGTGATTAAAGATGCAGCAGATCGCTATTTTCTCAGCTTTGTTGTCGAG
ATTCAGCCCGAAATACTTCCTAATAACGGGGAGTCCGTGGGAATCGATCTAGGGATTGCTACTTTTGCGACTCTCTCAACAGGGGAAAAGATAGACGCAC
CGAAACCGTTAAAGAAACAATTAAAACGGCTAAGAAAGGCACAGAAAAACCTTTCTAGAAAGCAAAAAGGAAGTAACCGACGGGAAAAAGCTAGGAAACG
AGTAGCTAAAATCCACGCAAAGATTAAGGACACTCGTACTGATTTCTTGCAGAAACTATCCACTAGAGTTGTTCGTGAAAATCAAACGATAATTTTAGAG
GATTTAAACACATCGGGAATGGTTAAAAATCGTAAGTTATCCCGTGCCATATCAGACTTAGGATGGCGTTCTTTCCGAGATATGCTATCGGCAAAATCTG
ATAAATATGGGCGTAATTTTCGGATAATTTCCCGATGGGAGCCAACGTCTCAGCGATGTTCCTGTTGTGGGAATATTGGCGGGAAAAAAGCGTTAAATAT
CCGTGAGTGGGAATGTCTTTTCTGTGGGACTTTTCATGATCGAGACGTGAACGCCGCAATTAATATCAAGGTCGCCGGTGGGCAATCGGAGACTTTAAAC
GGGCGTGGAGGACAGCATAAGACTTCTGTTAAAGAAGCAGCATCTCGTGAAGCGTCAACCCAGCGGTCGGTCGTTCAATTAAGTTTGTTTGATCTGCCGG
TCATCACCGTCCGGCCCCGGCGGTGAGGATGTCAA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1242 bp | 413 aa | 385 | 1626 | + | No |
AG : TnpB
ORF sequence :
MKARYQYRIYPTDQQKRLLSQLFGCVRIVWNDTLAYCQELYRQGEKKPKYTELSKRLTQIKKTTEKVWLTEVSSIPLQQSLRDLETAYSNFFASCKGERK
GRKVKPPKFKKRKSKQSARFTDNGFTINQYHVTLAKIGDLRIVWSRPLPSKPSSVTVIKDAADRYFLSFVVEIQPEILPNNGESVGIDLGIATFATLSTG
EKIDAPKPLKKQLKRLRKAQKNLSRKQKGSNRREKARKRVAKIHAKIKDTRTDFLQKLSTRVVRENQTIILEDLNTSGMVKNRKLSRAISDLGWRSFRDM
LSAKSDKYGRNFRIISRWEPTSQRCSCCGNIGGKKALNIREWECLFCGTFHDRDVNAAINIKVAGGQSETLNGRGGQHKTSVKEAASREASTQRSVVQLS
LFDLPVITVRPRR
GRKVKPPKFKKRKSKQSARFTDNGFTINQYHVTLAKIGDLRIVWSRPLPSKPSSVTVIKDAADRYFLSFVVEIQPEILPNNGESVGIDLGIATFATLSTG
EKIDAPKPLKKQLKRLRKAQKNLSRKQKGSNRREKARKRVAKIHAKIKDTRTDFLQKLSTRVVRENQTIILEDLNTSGMVKNRKLSRAISDLGWRSFRDM
LSAKSDKYGRNFRIISRWEPTSQRCSCCGNIGGKKALNIREWECLFCGTFHDRDVNAAINIKVAGGQSETLNGRGGQHKTSVKEAASREASTQRSVVQLS
LFDLPVITVRPRR
Blast result :
Comments
ISMae15 is 74% aa similar to ISTel2.
References
1] ISfinder submission (2018)
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.