ISMlu5
- Family ISL3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP001628 | ND | Micrococcus luteus | Micrococcus luteus NCTC 2665 |
DNA section
IS Length : 1426 bp
Ends
IR Length : 24
IRL : GGCTCTTCACGAACGAGGGTGTAGTCGGTTGAGCGCGTCGGTGGCCGGGT
IRR : GGCTCTTCACGAACGAGGGTGTAGCGCGGGTCTGAACCCTCCGGCTTCGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GCTCGGGACC | GGCAATCG | GGTCGCGACG | 8 |
DNA sequence
GGCTCTTCACGAACGAGGGTGTAGTCGGTTGAGCGCGTCGGTGGCCGGGTAGGGGTCGAGGTCTCCCGGATGATGGAAGTTCTTCACGCTCGCCATCCCG
AAAGACCTCGACGTGCTCCACCCTACTTTCGCGACCCCTGACCTGACCACGTTCTGCCGCCTTGACGAGCTCGGCCTCGTCGCCGTCGGCCAGCTGATCG
AGCCGGATCGGGCCACGATCGAATGCCGCGTCGTCGAGGACGACCCGTGGTGTCGGAAGTGCGGTGTCGAGGGCGTGCCGCGGGACACGGTCACGCGTCG
ACTGGCGCACGAGCCGTTCGGGCACCGGCCGACGACCCTGCTGGTGCGGGTGCGCCGGTACCGGTGCGGACACTGCCGGCGCACGTGGCGGCAGGACATG
ACGCGGGCAGCGGCGCCGCGTGCGAAGATCTCCCGCGGCGGCCTGGAGTGGGCGCTGCGGGGCATCGTCATCGACCACCTCACCGTCACCCGCGTCGCCG
CAGGTCTCGGGGTGTCCTGGAGTGCCGCGAACGCCGCCGTCCTCGCGGAAGGCAAGCGGCGCCTGATCGACGACCCCGCCCGGTTCGACGGGGTCACCAC
GATCGGTGTCGACGAGCACGTCTGGCGACACACGAGGCTGGGCGACAAGTACGTCACCGTGATCATCGACCTCACCCCCGCGAGGAACAAGACCGGGCCG
GCGAGGCTGCTGGACATGGTCGAGGGCCGCTCCAAGGCGGTGTTCAAGCAGTGGCTCGCCGCCCGCCCTGCGGACTGGGCGAAGCGGATCGAGGTGGTCG
CGATGGACGGCTTCGCCGGGTTCAAGACCGCTGCCGCCGAGGAACTCCCCGACGCCGTCCCCGTCATGGACCCGTTCCACGTGGTCCGCCTCGCCGGCGA
CGCGCTGGATGTCTGCCGGCGTCGGGTCCAGCAAGACACCACCGGTCACCGCGGGCTCAAGGGCGACCCGCTCTACAAAGCCCGCCGCACCCTGCACACC
GGGGCGAGCCTGCTCACCGACCGGCAGCGGGCACGCCTGGACGCAGTGTTCGCGAGCGAGGAGCACATCGAGGTCGAGGCGACCTGGGGCATCTACCAGC
GCATCGTCGCGGCCTACCGGGAGCCCGACAAGAAGAAAGCGAAGGCGATGATGCAGGAGGTGATCGCTACGATCAGCAGCGGCGTTCCCGCGGCGCTCGT
CGAGGTCCGCAAGCTCGGCCGGACCATGAAGCAGCGGGCGGGCGACATCCTCGCGTTCTTCGACCGCCCCGGCACCAGCAACGGCCCGACCGAGGCCATC
AACGGGCGGCTCGAACACCTCCGCGGCTCCGCCCTCGGCTTCCGCAACCTCACCCACTACATCGCTCGGTCACTGCTCGAAGCCGGAGGGTTCAGACCCG
CGCTACACCCTCGTTCGTGAAGAGCC
AAAGACCTCGACGTGCTCCACCCTACTTTCGCGACCCCTGACCTGACCACGTTCTGCCGCCTTGACGAGCTCGGCCTCGTCGCCGTCGGCCAGCTGATCG
AGCCGGATCGGGCCACGATCGAATGCCGCGTCGTCGAGGACGACCCGTGGTGTCGGAAGTGCGGTGTCGAGGGCGTGCCGCGGGACACGGTCACGCGTCG
ACTGGCGCACGAGCCGTTCGGGCACCGGCCGACGACCCTGCTGGTGCGGGTGCGCCGGTACCGGTGCGGACACTGCCGGCGCACGTGGCGGCAGGACATG
ACGCGGGCAGCGGCGCCGCGTGCGAAGATCTCCCGCGGCGGCCTGGAGTGGGCGCTGCGGGGCATCGTCATCGACCACCTCACCGTCACCCGCGTCGCCG
CAGGTCTCGGGGTGTCCTGGAGTGCCGCGAACGCCGCCGTCCTCGCGGAAGGCAAGCGGCGCCTGATCGACGACCCCGCCCGGTTCGACGGGGTCACCAC
GATCGGTGTCGACGAGCACGTCTGGCGACACACGAGGCTGGGCGACAAGTACGTCACCGTGATCATCGACCTCACCCCCGCGAGGAACAAGACCGGGCCG
GCGAGGCTGCTGGACATGGTCGAGGGCCGCTCCAAGGCGGTGTTCAAGCAGTGGCTCGCCGCCCGCCCTGCGGACTGGGCGAAGCGGATCGAGGTGGTCG
CGATGGACGGCTTCGCCGGGTTCAAGACCGCTGCCGCCGAGGAACTCCCCGACGCCGTCCCCGTCATGGACCCGTTCCACGTGGTCCGCCTCGCCGGCGA
CGCGCTGGATGTCTGCCGGCGTCGGGTCCAGCAAGACACCACCGGTCACCGCGGGCTCAAGGGCGACCCGCTCTACAAAGCCCGCCGCACCCTGCACACC
GGGGCGAGCCTGCTCACCGACCGGCAGCGGGCACGCCTGGACGCAGTGTTCGCGAGCGAGGAGCACATCGAGGTCGAGGCGACCTGGGGCATCTACCAGC
GCATCGTCGCGGCCTACCGGGAGCCCGACAAGAAGAAAGCGAAGGCGATGATGCAGGAGGTGATCGCTACGATCAGCAGCGGCGTTCCCGCGGCGCTCGT
CGAGGTCCGCAAGCTCGGCCGGACCATGAAGCAGCGGGCGGGCGACATCCTCGCGTTCTTCGACCGCCCCGGCACCAGCAACGGCCCGACCGAGGCCATC
AACGGGCGGCTCGAACACCTCCGCGGCTCCGCCCTCGGCTTCCGCAACCTCACCCACTACATCGCTCGGTCACTGCTCGAAGCCGGAGGGTTCAGACCCG
CGCTACACCCTCGTTCGTGAAGAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1308 bp | 435 aa | 113 | 1420 | + | No |
Chemistry : Unknow
ORF sequence :
MLHPTFATPDLTTFCRLDELGLVAVGQLIEPDRATIECRVVEDDPWCRKCGVEGVPRDTVTRRLAHEPFGHRPTTLLVRVRRYRCGHCRRTWRQDMTRAA
APRAKISRGGLEWALRGIVIDHLTVTRVAAGLGVSWSAANAAVLAEGKRRLIDDPARFDGVTTIGVDEHVWRHTRLGDKYVTVIIDLTPARNKTGPARLL
DMVEGRSKAVFKQWLAARPADWAKRIEVVAMDGFAGFKTAAAEELPDAVPVMDPFHVVRLAGDALDVCRRRVQQDTTGHRGLKGDPLYKARRTLHTGASL
LTDRQRARLDAVFASEEHIEVEATWGIYQRIVAAYREPDKKKAKAMMQEVIATISSGVPAALVEVRKLGRTMKQRAGDILAFFDRPGTSNGPTEAINGRL
EHLRGSALGFRNLTHYIARSLLEAGGFRPALHPRS
APRAKISRGGLEWALRGIVIDHLTVTRVAAGLGVSWSAANAAVLAEGKRRLIDDPARFDGVTTIGVDEHVWRHTRLGDKYVTVIIDLTPARNKTGPARLL
DMVEGRSKAVFKQWLAARPADWAKRIEVVAMDGFAGFKTAAAEELPDAVPVMDPFHVVRLAGDALDVCRRRVQQDTTGHRGLKGDPLYKARRTLHTGASL
LTDRQRARLDAVFASEEHIEVEATWGIYQRIVAAYREPDKKKAKAMMQEVIATISSGVPAALVEVRKLGRTMKQRAGDILAFFDRPGTSNGPTEAINGRL
EHLRGSALGFRNLTHYIARSLLEAGGFRPALHPRS
Blast result :
Comments
ISMlu5 is 92% aa similar to ISAar42.
References
1] ISfinder annotation (2018)
2] Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Lowry,S., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Lykidis,A., Young,M. and Greenblatt,C. (2009) Direct GenBank submission.
2] Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Lowry,S., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Lykidis,A., Young,M. and Greenblatt,C. (2009) Direct GenBank submission.