ISMbl1
- Family IS1595
- Group ISSod11
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
FP102531 | ND | Magnetovibrio blakemorei | Magnetovibrio blakemorei MV-1 |
DNA section
IS Length : 1159 bp
Ends
IR Length : 23/24
IRL : ATGGCTTATCGCGATGTCCCATCAGTCATTGAAATCTCACCATTGGCACG
IRR : ACGGCTTATCGCGATGTCCCATCATCGGATGATTTCGGGTTTTTCCCGCG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TTGAGAATGGGATTTCGATA | CATGGTCGGAACTCCTTTCC | 0 |
DNA sequence
ATGGCTTATCGCGATGTCCCATCAGTCATTGAAATCTCACCATTGGCACGGTATGATTCGTACCGATGGCGAAGCAACTCACCCTTCTTGATTTCCAGGA
ACGGTTCCCTGACGACAGGAGCTGTTACTGTCTGATACGGGATCGGCGATGGCCGGACGGGTTTGTCTGCCCCAAATGCGGCAGCAAAGATGCTTTTCTT
CTGACCAGTCTGGCATACACCTACGCGTGCAAGGAATGCCGTGGCCATACGTCGGTGACTGCAGGCACGATTATGCACCGGACTAAACTGGCGTTGCGGG
TCTGGTTCTGGGCGGCCCATCTTATGGCAACGCATTCGAACGGGATTTCGGCCCGACAGTTGGCGGCGCAGATGGGGATCGCCTACAGTTCGGCATGGTT
GCTGGAACAAAAACTGCGGCGTTCGATGATTGATCCAAGCCGAGATTTGTTGGATGGTGTCGTCGAGATTGATCAGACCGAGATACCGTTCCACGACAAC
GACGCACCCCGGAGCCCACTCAAGACCGGCAAAATCCTGATCATCGAAGCCGTCGAGATTCGTGATAGAACCAGCGGAAAGGCACAGAAACCCAAGCCTC
GTGGGTCGAAGTACCTCGACACCCTGTCGGGGCGCTGCCGTCTGGCGGTCATCCCCAGCAACGAGAAGCCGAACATCCACGCTTTCATTGCTACCAATAT
TGCCCCCGGATCTACCTTAATCTCCGATGGTCACGCTTCAATTCCTGGACTGGAGGGCTACCGGCACGATCCACGTGTCATTGGCAACATGGCGGCGCAC
ATTCCGCTGCAATGGATTCACCGAGTCTTCGCCCTTCTCAAACGTTGGGGCCTCGGCACTTATCATGGTTTTCGCCGCGAGCACATTGATGTCTACCTCA
ACGAATTCGTCTTTCGCTACAACCGTAGATATTATCGTCATGTGTCCTTTGAAACGATCCTTGGTATCGCCGCAAAGCATGCGCCAGCGTCCTATTGGGA
CATCGTCGGCCAGAATAATCCTCGCAAAGGCATCACCATGACGCGCCAGAGACCCCGGCGGCGCAAGACGGCAGAAGGTATGCGCGAGGACGGAACCGGC
CCTTATTCGCGCGGGAAAAACCCGAAATCATCCGATGATGGGACATCGCGATAAGCCGT
ACGGTTCCCTGACGACAGGAGCTGTTACTGTCTGATACGGGATCGGCGATGGCCGGACGGGTTTGTCTGCCCCAAATGCGGCAGCAAAGATGCTTTTCTT
CTGACCAGTCTGGCATACACCTACGCGTGCAAGGAATGCCGTGGCCATACGTCGGTGACTGCAGGCACGATTATGCACCGGACTAAACTGGCGTTGCGGG
TCTGGTTCTGGGCGGCCCATCTTATGGCAACGCATTCGAACGGGATTTCGGCCCGACAGTTGGCGGCGCAGATGGGGATCGCCTACAGTTCGGCATGGTT
GCTGGAACAAAAACTGCGGCGTTCGATGATTGATCCAAGCCGAGATTTGTTGGATGGTGTCGTCGAGATTGATCAGACCGAGATACCGTTCCACGACAAC
GACGCACCCCGGAGCCCACTCAAGACCGGCAAAATCCTGATCATCGAAGCCGTCGAGATTCGTGATAGAACCAGCGGAAAGGCACAGAAACCCAAGCCTC
GTGGGTCGAAGTACCTCGACACCCTGTCGGGGCGCTGCCGTCTGGCGGTCATCCCCAGCAACGAGAAGCCGAACATCCACGCTTTCATTGCTACCAATAT
TGCCCCCGGATCTACCTTAATCTCCGATGGTCACGCTTCAATTCCTGGACTGGAGGGCTACCGGCACGATCCACGTGTCATTGGCAACATGGCGGCGCAC
ATTCCGCTGCAATGGATTCACCGAGTCTTCGCCCTTCTCAAACGTTGGGGCCTCGGCACTTATCATGGTTTTCGCCGCGAGCACATTGATGTCTACCTCA
ACGAATTCGTCTTTCGCTACAACCGTAGATATTATCGTCATGTGTCCTTTGAAACGATCCTTGGTATCGCCGCAAAGCATGCGCCAGCGTCCTATTGGGA
CATCGTCGGCCAGAATAATCCTCGCAAAGGCATCACCATGACGCGCCAGAGACCCCGGCGGCGCAAGACGGCAGAAGGTATGCGCGAGGACGGAACCGGC
CCTTATTCGCGCGGGAAAAACCCGAAATCATCCGATGATGGGACATCGCGATAAGCCGT
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1089 bp | 362 aa | 66 | 1154 | + | No |
Chemistry : DDE
ORF sequence :
MAKQLTLLDFQERFPDDRSCYCLIRDRRWPDGFVCPKCGSKDAFLLTSLAYTYACKECRGHTSVTAGTIMHRTKLALRVWFWAAHLMATHSNGISARQLA
AQMGIAYSSAWLLEQKLRRSMIDPSRDLLDGVVEIDQTEIPFHDNDAPRSPLKTGKILIIEAVEIRDRTSGKAQKPKPRGSKYLDTLSGRCRLAVIPSNE
KPNIHAFIATNIAPGSTLISDGHASIPGLEGYRHDPRVIGNMAAHIPLQWIHRVFALLKRWGLGTYHGFRREHIDVYLNEFVFRYNRRYYRHVSFETILG
IAAKHAPASYWDIVGQNNPRKGITMTRQRPRRRKTAEGMREDGTGPYSRGKNPKSSDDGTSR
AQMGIAYSSAWLLEQKLRRSMIDPSRDLLDGVVEIDQTEIPFHDNDAPRSPLKTGKILIIEAVEIRDRTSGKAQKPKPRGSKYLDTLSGRCRLAVIPSNE
KPNIHAFIATNIAPGSTLISDGHASIPGLEGYRHDPRVIGNMAAHIPLQWIHRVFALLKRWGLGTYHGFRREHIDVYLNEFVFRYNRRYYRHVSFETILG
IAAKHAPASYWDIVGQNNPRKGITMTRQRPRRRKTAEGMREDGTGPYSRGKNPKSSDDGTSR
Blast result :
Comments
ISMbl1 is 63% aa similar to ISApr2.
References
1] ISfinder annotation (2017)
2] Jogler,C., Kube,M., Schubbe,S., Ullrich,S., Teeling,H., Bazylinski,D.A., Reinhardt,R. and Schuler,D. (2009) Environ. Microbiol. 11 (5), 1267-1277.
2] Jogler,C., Kube,M., Schubbe,S., Ullrich,S., Teeling,H., Bazylinski,D.A., Reinhardt,R. and Schuler,D. (2009) Environ. Microbiol. 11 (5), 1267-1277.