ISMags1
- Family ISNCY
- Group ISDol1
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
JPDT01000319 | ND | Candidatus Magnetomorum | Candidatus Magnetomorum sp. HK-1 HK1c0320 |
DNA section
IS Length : 1984 bp
Ends
IR Length : 14/15
IRL : GTGTCTGGCCGAAAACAAATAACTTTCTATAAAATTAATATGTTGTTGTC
IRR : GTGCCTGGCCGAAAAAGGCAAAATTGAATAAATCCGCCCTTATTCCGAAC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CGAGTATGCC | TAATTT | CAATCAAAAA | 6 |
DNA sequence
GTGTCTGGCCGAAAACAAATAACTTTCTATAAAATTAATATGTTGTTGTCAAATTGATCCAATGAAGATTTAAGTAAATTACTACAAATTTTCTTGACAA
ATTAACTTTAATAGTTTACATAAGTTATTAATATAATTTTACATATGCTATTTTTTATGGTATAAAAATTGCAGTAGAACTTTTCTTCTTTTCAACAATC
TTCAAAGGAGCATCTTATGAGATTTGCATCTGAACAACAACCTAAATTGAACCAAATTCATATTAGCGATATAAAAATTGACCTTTCATCTCGTGATGAA
ATACCCAAAATTTTAATTGGTCTAAAGCATCTTTATGAAAACAAAGAGCTTAGAGATCAAATTTTTGAAATCCTTTATGATGCATTGCCTGAAAATGTAA
GCACTAAAAAGGGACGACGTGGAATGGATTTATGGAAGATCTTAGTTCTTGGCGTTGTGCGTCTTAACTGCAACTGGGACTATGATAAAGTTCAAGAAAT
TGCAAATAATCATATAACACTTAGACAAATGTTGGGTCATGGATTTAAAATAGGAACTAATGCAAGCGATGATGCTGAACGCTATGCTTTACAGACAATA
AAGGATAATGTTTCATTGTTAACACCAGAAATACTCGACCGAATAAATGAAGTTGTAGTCAAGGAAGGGCATAAGATTTTGAATAAAAAAGAAATTAAAA
CAGAAGAAAAAGATAATACGACTAAACAAAACAGTATTAAATTGAAAGGAAAATGCGATTCATACGTAGTAGAAACAGATGTTCATTTTCCGACAGATAT
AAATCTTTTGTTTGATTCTGTCAGAGTAATGATTAGGTTAATAGCAGCATTATGCTGCACTTTGGGAATTGATGAATGGCGACAGCATGTTTACCATATT
GGTAAAATAAAAAGATTTTATCGTGTGATAATGAAGTTAAAAAGATCAACATCAAAAGATGAGGATAAAAAAGCAGAAAGAGATCAAAAAATAAAAGATG
CATATGCAGATTATATAGAATTGGTTCAGAGCTATGTTGAAAGATGCATATTGACAATAAAAACTATTCGAGAAATGGGAACTGATTTTTTAATAAATGC
TCAGATAAAAAATATTGAAGAAAAGATAGAAAAGGCTGAGATATTTTTAGACCAAATAGAGAGAAGGGCAATAGAAGAAGAAAAAATACCACATAATGAA
AAAATATTTTCAATATTTGAAGAACATACTGAATGGATTAAAAAAGGTAAAGCTGGAGTATTAGTTGAGTTAGGAGTAAGAGTGAGCATACTTGAAGATC
AACATGGATTCATATTAACTCACACAGTAATGGAAAAGAAAACAGACGATAAGGTAGCAGTAGAAATAGTAAAAAATGCGAAAGAGAAGTACCCAGAATT
GACAAGTTGCAGCTTTGATAAAGGTTATTATACCCCTAACAATAGGAAAGAATTGGAGGAAATCCTTGAAAGTGTGATAATGCCCAAAAAAGGAAAGCGA
AGTAAAGCAGATGAAGAAAAAGAAAATTCCGAAGAATTTATTAGAGCGAGAAAAAAACATTCACGAGTAGAATCAGCAATAAATGCACTTGAAAATCATG
GATTGGATAAATGTCCTGACCATGGAATAAAAGGATTTAAACGATATGTCTCACTTGGAATTTTAGGAAGAAATATACAGCAATTAGGGCATATAATTCA
ACAGGAACAACAAAAAAAGGAAAAAAGAAAGAAAAAGGTTCAGGAGACTTGGCGAAATAAAAAAGCAGCGTAGCAAGGTAAGAATTAAAAAGGGGGAAAA
AATGAAAAAGATGGATAACTATGTAGAAGTTTATATTGATAGTGTTGATTTAGGTAGCGATTATATCGAGGCATCTCTTTTGAGGGTTGCTCATAAAATG
AATGGCATTCATTTTATATTTTCACGGAACGTCTGTTCGGAATAAGGGCGGATTTATTCAATTTTGCCTTTTTCGGCCAGGCAC
ATTAACTTTAATAGTTTACATAAGTTATTAATATAATTTTACATATGCTATTTTTTATGGTATAAAAATTGCAGTAGAACTTTTCTTCTTTTCAACAATC
TTCAAAGGAGCATCTTATGAGATTTGCATCTGAACAACAACCTAAATTGAACCAAATTCATATTAGCGATATAAAAATTGACCTTTCATCTCGTGATGAA
ATACCCAAAATTTTAATTGGTCTAAAGCATCTTTATGAAAACAAAGAGCTTAGAGATCAAATTTTTGAAATCCTTTATGATGCATTGCCTGAAAATGTAA
GCACTAAAAAGGGACGACGTGGAATGGATTTATGGAAGATCTTAGTTCTTGGCGTTGTGCGTCTTAACTGCAACTGGGACTATGATAAAGTTCAAGAAAT
TGCAAATAATCATATAACACTTAGACAAATGTTGGGTCATGGATTTAAAATAGGAACTAATGCAAGCGATGATGCTGAACGCTATGCTTTACAGACAATA
AAGGATAATGTTTCATTGTTAACACCAGAAATACTCGACCGAATAAATGAAGTTGTAGTCAAGGAAGGGCATAAGATTTTGAATAAAAAAGAAATTAAAA
CAGAAGAAAAAGATAATACGACTAAACAAAACAGTATTAAATTGAAAGGAAAATGCGATTCATACGTAGTAGAAACAGATGTTCATTTTCCGACAGATAT
AAATCTTTTGTTTGATTCTGTCAGAGTAATGATTAGGTTAATAGCAGCATTATGCTGCACTTTGGGAATTGATGAATGGCGACAGCATGTTTACCATATT
GGTAAAATAAAAAGATTTTATCGTGTGATAATGAAGTTAAAAAGATCAACATCAAAAGATGAGGATAAAAAAGCAGAAAGAGATCAAAAAATAAAAGATG
CATATGCAGATTATATAGAATTGGTTCAGAGCTATGTTGAAAGATGCATATTGACAATAAAAACTATTCGAGAAATGGGAACTGATTTTTTAATAAATGC
TCAGATAAAAAATATTGAAGAAAAGATAGAAAAGGCTGAGATATTTTTAGACCAAATAGAGAGAAGGGCAATAGAAGAAGAAAAAATACCACATAATGAA
AAAATATTTTCAATATTTGAAGAACATACTGAATGGATTAAAAAAGGTAAAGCTGGAGTATTAGTTGAGTTAGGAGTAAGAGTGAGCATACTTGAAGATC
AACATGGATTCATATTAACTCACACAGTAATGGAAAAGAAAACAGACGATAAGGTAGCAGTAGAAATAGTAAAAAATGCGAAAGAGAAGTACCCAGAATT
GACAAGTTGCAGCTTTGATAAAGGTTATTATACCCCTAACAATAGGAAAGAATTGGAGGAAATCCTTGAAAGTGTGATAATGCCCAAAAAAGGAAAGCGA
AGTAAAGCAGATGAAGAAAAAGAAAATTCCGAAGAATTTATTAGAGCGAGAAAAAAACATTCACGAGTAGAATCAGCAATAAATGCACTTGAAAATCATG
GATTGGATAAATGTCCTGACCATGGAATAAAAGGATTTAAACGATATGTCTCACTTGGAATTTTAGGAAGAAATATACAGCAATTAGGGCATATAATTCA
ACAGGAACAACAAAAAAAGGAAAAAAGAAAGAAAAAGGTTCAGGAGACTTGGCGAAATAAAAAAGCAGCGTAGCAAGGTAAGAATTAAAAAGGGGGAAAA
AATGAAAAAGATGGATAACTATGTAGAAGTTTATATTGATAGTGTTGATTTAGGTAGCGATTATATCGAGGCATCTCTTTTGAGGGTTGCTCATAAAATG
AATGGCATTCATTTTATATTTTCACGGAACGTCTGTTCGGAATAAGGGCGGATTTATTCAATTTTGCCTTTTTCGGCCAGGCAC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1557 bp | 518 aa | 217 | 1773 | + | No |
Chemistry : DDE
ORF sequence :
MRFASEQQPKLNQIHISDIKIDLSSRDEIPKILIGLKHLYENKELRDQIFEILYDALPENVSTKKGRRGMDLWKILVLGVVRLNCNWDYDKVQEIANNHI
TLRQMLGHGFKIGTNASDDAERYALQTIKDNVSLLTPEILDRINEVVVKEGHKILNKKEIKTEEKDNTTKQNSIKLKGKCDSYVVETDVHFPTDINLLFD
SVRVMIRLIAALCCTLGIDEWRQHVYHIGKIKRFYRVIMKLKRSTSKDEDKKAERDQKIKDAYADYIELVQSYVERCILTIKTIREMGTDFLINAQIKNI
EEKIEKAEIFLDQIERRAIEEEKIPHNEKIFSIFEEHTEWIKKGKAGVLVELGVRVSILEDQHGFILTHTVMEKKTDDKVAVEIVKNAKEKYPELTSCSF
DKGYYTPNNRKELEEILESVIMPKKGKRSKADEEKENSEEFIRARKKHSRVESAINALENHGLDKCPDHGIKGFKRYVSLGILGRNIQQLGHIIQQEQQK
KEKRKKKVQETWRNKKAA
TLRQMLGHGFKIGTNASDDAERYALQTIKDNVSLLTPEILDRINEVVVKEGHKILNKKEIKTEEKDNTTKQNSIKLKGKCDSYVVETDVHFPTDINLLFD
SVRVMIRLIAALCCTLGIDEWRQHVYHIGKIKRFYRVIMKLKRSTSKDEDKKAERDQKIKDAYADYIELVQSYVERCILTIKTIREMGTDFLINAQIKNI
EEKIEKAEIFLDQIERRAIEEEKIPHNEKIFSIFEEHTEWIKKGKAGVLVELGVRVSILEDQHGFILTHTVMEKKTDDKVAVEIVKNAKEKYPELTSCSF
DKGYYTPNNRKELEEILESVIMPKKGKRSKADEEKENSEEFIRARKKHSRVESAINALENHGLDKCPDHGIKGFKRYVSLGILGRNIQQLGHIIQQEQQK
KEKRKKKVQETWRNKKAA
Blast result :
Comments
ISMags1 is 65% aa similar to ISPph5.
References
1] ISfinder annotation (2016)
2] Kolinko,S., Richter,M., Glockner,F.O., Brachmann,A. and Schuler,D. (2014) Direct submission GenBank.
2] Kolinko,S., Richter,M., Glockner,F.O., Brachmann,A. and Schuler,D. (2014) Direct submission GenBank.