ISMaq7
- Family IS256
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP000514 | ND | Marinobacter aquaeolei | Marinobacter aquaeolei VT8 |
DNA section
IS Length : 1379 bp
Ends
IR Length : 24/27
IRL : GAGTTATGGTCATTTCTGGTGTACGGGAAGGTAGAAAGGATGGCGTATCC
IRR : GAGTTATTGTCAAATCTGGTGTACGGGCTCAGGCGGCGTTCCTGTCTGAC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TTGGCAACCT | CGATTCTCA | TCACCCTGGT | 9 |
DNA sequence
GAGTTATGGTCATTTCTGGTGTACGGGAAGGTAGAAAGGATGGCGTATCCTGTTGATTGATCACGCCAGATCAACAACCAACAGAAGGTGATACGCCATG
GCCAAGTCTACCCTGAAGACTCTTCCACAACCAGAAAAAGACGTTATTGATCCGCTGACCGAGCTGCTGCGGACTGGGGCACGGGAGCTGATCGCACAGG
CCGTCGAGGCCGAGCTTCAGGCGCTTCTGGATCAGCATGCCGAGCACCGGCTCCCGGATGGCCGTCAGGCCGTCGTGCGCAATGGCTATTTGCCTGAGCG
TACTGTCCAGACCGGCATCGGCAATGTCGACATCAAGGTGCCGAAAGTACGGGATCGGAGTGGTTCCGGGGTTCGCTTCAACAGCACCTTGCTGCCGCCG
TACCTGAAGCGAGCCCGGAGTGTGGAGGAAGTGCTTCCCTGGCTGTACCTGAAGGGTGTGAGCACCGGCGATTACCAAGAGGCACTGGCGGCCTTGCTGG
GTGATCAGGCCAGGGGCTTGTCGGCCAATACGATCAGTCGCTTGAAGCAGCACTGGATCGATGAGCACCGGGAGTGGTGTCAGCGAGATCTGAGCCAAAG
CCGCTACGTGTACTGGTGGGCCGACGGCGTATACAGCAACGTGCGCATGGATGACCGCCTCTGCCTGCTGGTGATCATCGGGGTGACGGAGCATGGGCGC
AAGGAGCTGGTTGCGGTTGAGGACGGCTACCGCGAGTCGGAGGCCAGCTGGTCAGAACTGCTGTCGGGACTGCGGGCCCGAGGCCTGACGACCAGCCCGA
AGCTGGCCATCGGCGACGGCGCTTTGGGCTTCTGGAAAGCACTGGCCAAGTGCTATCCGGACACCCGCCATCAGCGCTGCTGGGTGCACAAGAGCGCGAA
CATCCTGTCCGCGCTGCCAAAGTCGGTGCAACCGAAGGTCAAGGCGGCGCTGCATGAGATCTGGATGGCCGAGACGCAGGACGAGGCGCACAAGGCATTT
GACCGGGCGCTTGTACGCTTTGAGTCGAAGTATCCCGGCGCCATGGAACGGCTGCGCAAGGATCGTGAAGAGCTGCTGGCCTTCTACGACTTCCCGGCGG
AGCACTGGGTCCATATCCGGACGACCAATCCGATCGAATCGACGTTTTCGACGGTGCGCCTGAGAAGCAAGAGAGCGCGGAACTGCGGCTCCCGAGAGAC
CACGCTGGCGATGGTCTACAAGCTACTGGAAACCGCGCAGAAGCGCTGGAAACGGATCAAGGGATTTGATCTGCTGGCCCTCGTGGTCAACAACGTGAAA
TTCAAGGATGGGGAACAAGTACAGGATCAGTCAGACAGGAACGCCGCCTGAGCCCGTACACCAGATTTGACAATAACTC
GCCAAGTCTACCCTGAAGACTCTTCCACAACCAGAAAAAGACGTTATTGATCCGCTGACCGAGCTGCTGCGGACTGGGGCACGGGAGCTGATCGCACAGG
CCGTCGAGGCCGAGCTTCAGGCGCTTCTGGATCAGCATGCCGAGCACCGGCTCCCGGATGGCCGTCAGGCCGTCGTGCGCAATGGCTATTTGCCTGAGCG
TACTGTCCAGACCGGCATCGGCAATGTCGACATCAAGGTGCCGAAAGTACGGGATCGGAGTGGTTCCGGGGTTCGCTTCAACAGCACCTTGCTGCCGCCG
TACCTGAAGCGAGCCCGGAGTGTGGAGGAAGTGCTTCCCTGGCTGTACCTGAAGGGTGTGAGCACCGGCGATTACCAAGAGGCACTGGCGGCCTTGCTGG
GTGATCAGGCCAGGGGCTTGTCGGCCAATACGATCAGTCGCTTGAAGCAGCACTGGATCGATGAGCACCGGGAGTGGTGTCAGCGAGATCTGAGCCAAAG
CCGCTACGTGTACTGGTGGGCCGACGGCGTATACAGCAACGTGCGCATGGATGACCGCCTCTGCCTGCTGGTGATCATCGGGGTGACGGAGCATGGGCGC
AAGGAGCTGGTTGCGGTTGAGGACGGCTACCGCGAGTCGGAGGCCAGCTGGTCAGAACTGCTGTCGGGACTGCGGGCCCGAGGCCTGACGACCAGCCCGA
AGCTGGCCATCGGCGACGGCGCTTTGGGCTTCTGGAAAGCACTGGCCAAGTGCTATCCGGACACCCGCCATCAGCGCTGCTGGGTGCACAAGAGCGCGAA
CATCCTGTCCGCGCTGCCAAAGTCGGTGCAACCGAAGGTCAAGGCGGCGCTGCATGAGATCTGGATGGCCGAGACGCAGGACGAGGCGCACAAGGCATTT
GACCGGGCGCTTGTACGCTTTGAGTCGAAGTATCCCGGCGCCATGGAACGGCTGCGCAAGGATCGTGAAGAGCTGCTGGCCTTCTACGACTTCCCGGCGG
AGCACTGGGTCCATATCCGGACGACCAATCCGATCGAATCGACGTTTTCGACGGTGCGCCTGAGAAGCAAGAGAGCGCGGAACTGCGGCTCCCGAGAGAC
CACGCTGGCGATGGTCTACAAGCTACTGGAAACCGCGCAGAAGCGCTGGAAACGGATCAAGGGATTTGATCTGCTGGCCCTCGTGGTCAACAACGTGAAA
TTCAAGGATGGGGAACAAGTACAGGATCAGTCAGACAGGAACGCCGCCTGAGCCCGTACACCAGATTTGACAATAACTC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1254 bp | 417 aa | 98 | 1351 | + | No |
Chemistry : DDE
ORF sequence :
MAKSTLKTLPQPEKDVIDPLTELLRTGARELIAQAVEAELQALLDQHAEHRLPDGRQAVVRNGYLPERTVQTGIGNVDIKVPKVRDRSGSGVRFNSTLLP
PYLKRARSVEEVLPWLYLKGVSTGDYQEALAALLGDQARGLSANTISRLKQHWIDEHREWCQRDLSQSRYVYWWADGVYSNVRMDDRLCLLVIIGVTEHG
RKELVAVEDGYRESEASWSELLSGLRARGLTTSPKLAIGDGALGFWKALAKCYPDTRHQRCWVHKSANILSALPKSVQPKVKAALHEIWMAETQDEAHKA
FDRALVRFESKYPGAMERLRKDREELLAFYDFPAEHWVHIRTTNPIESTFSTVRLRSKRARNCGSRETTLAMVYKLLETAQKRWKRIKGFDLLALVVNNV
KFKDGEQVQDQSDRNAA
PYLKRARSVEEVLPWLYLKGVSTGDYQEALAALLGDQARGLSANTISRLKQHWIDEHREWCQRDLSQSRYVYWWADGVYSNVRMDDRLCLLVIIGVTEHG
RKELVAVEDGYRESEASWSELLSGLRARGLTTSPKLAIGDGALGFWKALAKCYPDTRHQRCWVHKSANILSALPKSVQPKVKAALHEIWMAETQDEAHKA
FDRALVRFESKYPGAMERLRKDREELLAFYDFPAEHWVHIRTTNPIESTFSTVRLRSKRARNCGSRETTLAMVYKLLETAQKRWKRIKGFDLLALVVNNV
KFKDGEQVQDQSDRNAA
Blast result :
Comments
ISMaq7 is 91% aa similar to ISAeme25.
La transposase is Maqu_1721.
La transposase is Maqu_1721.
References
1] Pfeiffer F. (2015) Direct submission
2] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Kiss,H., Brettin,T., Bruce,D., Han,C., Tapia,R., Gilna,P., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Edwards,K. and Richardson,P. (2006) Direct submission to GenBank
2] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Kiss,H., Brettin,T., Bruce,D., Han,C., Tapia,R., Gilna,P., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Edwards,K. and Richardson,P. (2006) Direct submission to GenBank