ISOan8
- Family IS256
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_DS990574.1 | ND | Octadecabacter antarcticus | Octadecabacter antarcticus 307 |
DNA section
IS Length : 1387 bp
Ends
IR Length : 21/27
IRL : GAGTTATGACTGAATCTGGTGTTTGGGCGGTTTGAAGGTTGGCGGCGTAT
IRR : GAGTTATTGTCAAATCTGGTGTTTGAGGTTTGTCGGTCATGCGGCGATCT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GGTCCGGCGA | ATCCGGACA | GCGTGCTAAG | 9 |
DNA sequence
GAGTTATGACTGAATCTGGTGTTTGGGCGGTTTGAAGGTTGGCGGCGTATCTGGTTGAATTGTTGTTGCGAGACAGCAGCCCAATCGAAGGAGATACACC
ACCGTGGAAACGACTAACATTGTTGATTTTGCGCGTCGAGACGGGATGACTGACGCGTTAACGGAATTGCTGAAGTCTGGAGCGCAGGAATTGATAGCAT
CAGCCGTAGAGGCCGAACTGGCATGCTACATGGTGCAGTTCTCCGAAGTGCGGACCCAGTCGGGCCACGCGGCTGTCGTGCGCAACGGGCATCATCCAGC
CCGCCCTTTTCAAACAGGTATCGGGCCTGTGAGCGTGCGGATACCCAAGGTCCGCTCAAAAGACGGCACGCCCGTGACCTTTCGCTCCGCCCTGGTGCCG
CTCTATGTGCGTAGAACCAAGTCGCTGGAAGCAGCCTTGCCCTGGCTTTACCTTAAAGGTGTTTCCAGCGGTGAGATGGGCGCGGCCCTCAAGGTCCTGC
TCGGCCCTGATGCGGCGGGATTATCCGCTAACACGGTGTCACGCCTCAAGCGGGGTTGGGCTACCGAGTATGATGGCTGGCGAAAGACTGCATTGGACGA
CGAGCCAATCGTCTATATCTGGGCTGACGGCGTCCACAGCGGCTTGCGCGGAACCGACGACAAGCTCTGCGCCCTTGTGATTGTTGGCGTGAAAGCACGT
GGCAAGAAGCGGTTCTTGGCCATTGAGGACGGGGTGCGCAAGTCCACTCAAAGCTGGCGTGAGGTTCTTCTCAACCTCAAAGAGCGAGGCATGAACGCGC
CAAAGCTGGCTATCGGGGATGGTGCTATGGGGTTCTGGGCTGCAATGGATGAAGTATATCCCGCAGCGCGTCAACAACGCCGCTGGCAGCACAAAGCGAT
GAACGTGCTCAATTGTCTGCCAAAGCTGTCTCAACCAAAGGCAAAAGTCGCGATACACGATATCTGGCAGGCTGAAACCAAAGATGATGCGATCAAGGCT
TTTGATTTGTTCGTCAAAACCTATGAGGCAAAGTATCCCAAGGCCACCCTGTGCCTACAAAAGGACCGTGAGGAGCTCATGGCATTCTTCGACTTTCCAG
CCCAGCATTGGCAAAGCATACGCACCAGCAATCCGATTGAGTCTGCGTTCGCCACAATCAGGCATCGTACCAAGCGTTCAAAGGGCTGCCTCACCCGCGA
CGGCATGTTGCACATGATGTTCAAACTGGGGCAATGCGCCGAACAAAGCTGGAGAAAATTACGCGGCTTTGATTACCTCGCCAAAGTCATCACAGGCGTC
ACGTTCAAAGACGGAATTGAAGCCACAAACCCAGACCAGATCGCCGCATGACCGACAAACCTCAAACACCAGATTTGACAATAACTC
ACCGTGGAAACGACTAACATTGTTGATTTTGCGCGTCGAGACGGGATGACTGACGCGTTAACGGAATTGCTGAAGTCTGGAGCGCAGGAATTGATAGCAT
CAGCCGTAGAGGCCGAACTGGCATGCTACATGGTGCAGTTCTCCGAAGTGCGGACCCAGTCGGGCCACGCGGCTGTCGTGCGCAACGGGCATCATCCAGC
CCGCCCTTTTCAAACAGGTATCGGGCCTGTGAGCGTGCGGATACCCAAGGTCCGCTCAAAAGACGGCACGCCCGTGACCTTTCGCTCCGCCCTGGTGCCG
CTCTATGTGCGTAGAACCAAGTCGCTGGAAGCAGCCTTGCCCTGGCTTTACCTTAAAGGTGTTTCCAGCGGTGAGATGGGCGCGGCCCTCAAGGTCCTGC
TCGGCCCTGATGCGGCGGGATTATCCGCTAACACGGTGTCACGCCTCAAGCGGGGTTGGGCTACCGAGTATGATGGCTGGCGAAAGACTGCATTGGACGA
CGAGCCAATCGTCTATATCTGGGCTGACGGCGTCCACAGCGGCTTGCGCGGAACCGACGACAAGCTCTGCGCCCTTGTGATTGTTGGCGTGAAAGCACGT
GGCAAGAAGCGGTTCTTGGCCATTGAGGACGGGGTGCGCAAGTCCACTCAAAGCTGGCGTGAGGTTCTTCTCAACCTCAAAGAGCGAGGCATGAACGCGC
CAAAGCTGGCTATCGGGGATGGTGCTATGGGGTTCTGGGCTGCAATGGATGAAGTATATCCCGCAGCGCGTCAACAACGCCGCTGGCAGCACAAAGCGAT
GAACGTGCTCAATTGTCTGCCAAAGCTGTCTCAACCAAAGGCAAAAGTCGCGATACACGATATCTGGCAGGCTGAAACCAAAGATGATGCGATCAAGGCT
TTTGATTTGTTCGTCAAAACCTATGAGGCAAAGTATCCCAAGGCCACCCTGTGCCTACAAAAGGACCGTGAGGAGCTCATGGCATTCTTCGACTTTCCAG
CCCAGCATTGGCAAAGCATACGCACCAGCAATCCGATTGAGTCTGCGTTCGCCACAATCAGGCATCGTACCAAGCGTTCAAAGGGCTGCCTCACCCGCGA
CGGCATGTTGCACATGATGTTCAAACTGGGGCAATGCGCCGAACAAAGCTGGAGAAAATTACGCGGCTTTGATTACCTCGCCAAAGTCATCACAGGCGTC
ACGTTCAAAGACGGAATTGAAGCCACAAACCCAGACCAGATCGCCGCATGACCGACAAACCTCAAACACCAGATTTGACAATAACTC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1248 bp | 415 aa | 104 | 1351 | + | No |
Chemistry : DDE
ORF sequence :
METTNIVDFARRDGMTDALTELLKSGAQELIASAVEAELACYMVQFSEVRTQSGHAAVVRNGHHPARPFQTGIGPVSVRIPKVRSKDGTPVTFRSALVPL
YVRRTKSLEAALPWLYLKGVSSGEMGAALKVLLGPDAAGLSANTVSRLKRGWATEYDGWRKTALDDEPIVYIWADGVHSGLRGTDDKLCALVIVGVKARG
KKRFLAIEDGVRKSTQSWREVLLNLKERGMNAPKLAIGDGAMGFWAAMDEVYPAARQQRRWQHKAMNVLNCLPKLSQPKAKVAIHDIWQAETKDDAIKAF
DLFVKTYEAKYPKATLCLQKDREELMAFFDFPAQHWQSIRTSNPIESAFATIRHRTKRSKGCLTRDGMLHMMFKLGQCAEQSWRKLRGFDYLAKVITGVT
FKDGIEATNPDQIAA
YVRRTKSLEAALPWLYLKGVSSGEMGAALKVLLGPDAAGLSANTVSRLKRGWATEYDGWRKTALDDEPIVYIWADGVHSGLRGTDDKLCALVIVGVKARG
KKRFLAIEDGVRKSTQSWREVLLNLKERGMNAPKLAIGDGAMGFWAAMDEVYPAARQQRRWQHKAMNVLNCLPKLSQPKAKVAIHDIWQAETKDDAIKAF
DLFVKTYEAKYPKATLCLQKDREELMAFFDFPAQHWQSIRTSNPIESAFATIRHRTKRSKGCLTRDGMLHMMFKLGQCAEQSWRKLRGFDYLAKVITGVT
FKDGIEATNPDQIAA
Blast result :
Comments
ISOan8 is 92% aa similar to ISOan6.
References
1] Romain Guérillot and Philippe Glaser (2013) Direct submission.
2] Brinkhoff,T., Wawrik,B., Simon,M., Ferriera,S., Johnson,J., Kravitz,S., Beeson,K., Sutton,G., Rogers,Y.-H., Friedman,R., Frazier,M. and Venter,J.C. (2008) Direct submission GenBank.
2] Brinkhoff,T., Wawrik,B., Simon,M., Ferriera,S., Johnson,J., Kravitz,S., Beeson,K., Sutton,G., Rogers,Y.-H., Friedman,R., Frazier,M. and Venter,J.C. (2008) Direct submission GenBank.