ISMae24
- Family IS630
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_010296 | ND | Microcystis aeruginosa | Microcystis aeruginosa NIES-843 |
DNA section
IS Length : 1084 bp
Ends
IR Length : 19/23
IRL : AGTAGTCATGCAAAATTAATTACCCAAATAAAAAATTAAGAAGTATAATA
IRR : AGTACCTAGGCAAAATTAATTACATACTCGCCTCCAAAATTGTCCAGCAC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TATAACCAGC | TA | CTTAAATCCC | 2 |
AAAGAATGAT | TA | TTTATTCCCC | 2 |
GAAGACCTGT | TA | TAGCTGGAAC | 2 |
CTTACTCAAA | TA | TCAGTCTAGC | 2 |
GCTCTTCTCC | TA | ATTGCTTTTC | 2 |
DNA sequence
AGTAGTCATGCAAAATTAATTACCCAAATAAAAAATTAAGAAGTATAATACATAAAAAAACGAAGCAGCAGGAAAATACAATGAGATTGATTAGAGACCT
AAACCCCGAGAGCCAGAAAATGCTAGAGAGAATTTATCGAGCTAGTAAACATCATCAAGTAAGAGAGCGAGCGAAATGTATACTCTTAAGTTTTCAGGGA
ACCACGATAGAAGAATTGAGCGGAATATTTGGAGTTACGAGAAAGACCATCTATAATTGGTTGACGGCCTGGGAAGATAGAAAACTAATTGGTTTTTATA
ATCGTCGAGGAAGAGGGAGAAAACCTAAATTGACAGAAGCCCAAGGTCAACAAGTTATTGACTGGGTAAAAGAAGAACCGAAAAGCTTAAAAAAAATCCA
GATAAAAATTGTAGAAGAAGGGAAATTAACCGTAAGCAAAGACACGATAAAAAGACTCATAAAAAAAATCAACATGAGGTGGAAAAGGGTGAGAAGAGGG
GTCGCCAAAACCCCTGATGAGTGGGAGCTTGAGGTCAAACTACCTATTTTAGAAGAACTAAAAAAACAGGAAAAAAGAGGAGAGATTGAGATAGGATATT
TGGATGAAATGGGAGGGGATTCAAAGCCTTGTATTCCTGACGCTTGGCAAGAAGAAAAAACCACGATAAAGTTACCACCAATTGAAGGTAAAAGACTAAA
TATTTTAGGAATAATGAAACGAGATAATCAATTATTTTATGAGACACAGGTCGGAACGGTTACTAGCGAGATAGTTATTAATTTTCTGGATAAATATTGC
CAAAATATACAGAAAAAAACTGTCATAATAATTGACCAAGCTTCCATTCATACCAGCGAGGCATTTATGGAGAAACTTGAGGAATGGGAAAAGAAAAACT
TGAAAATATTTTGGTTGCCCACTTATTCACCTCATTTAAATTTAATTGAAATATTATGGAGATTTTTAAAATATGAATGGATTGAATTTAGCGCCTATAA
AGACCGAAAGAGCCTCCTCGCTTACGTTAAAAAAGTGCTGGACAATTTTGGAGGCGAGTATGTAATTAATTTTGCCTAGGTACT
AAACCCCGAGAGCCAGAAAATGCTAGAGAGAATTTATCGAGCTAGTAAACATCATCAAGTAAGAGAGCGAGCGAAATGTATACTCTTAAGTTTTCAGGGA
ACCACGATAGAAGAATTGAGCGGAATATTTGGAGTTACGAGAAAGACCATCTATAATTGGTTGACGGCCTGGGAAGATAGAAAACTAATTGGTTTTTATA
ATCGTCGAGGAAGAGGGAGAAAACCTAAATTGACAGAAGCCCAAGGTCAACAAGTTATTGACTGGGTAAAAGAAGAACCGAAAAGCTTAAAAAAAATCCA
GATAAAAATTGTAGAAGAAGGGAAATTAACCGTAAGCAAAGACACGATAAAAAGACTCATAAAAAAAATCAACATGAGGTGGAAAAGGGTGAGAAGAGGG
GTCGCCAAAACCCCTGATGAGTGGGAGCTTGAGGTCAAACTACCTATTTTAGAAGAACTAAAAAAACAGGAAAAAAGAGGAGAGATTGAGATAGGATATT
TGGATGAAATGGGAGGGGATTCAAAGCCTTGTATTCCTGACGCTTGGCAAGAAGAAAAAACCACGATAAAGTTACCACCAATTGAAGGTAAAAGACTAAA
TATTTTAGGAATAATGAAACGAGATAATCAATTATTTTATGAGACACAGGTCGGAACGGTTACTAGCGAGATAGTTATTAATTTTCTGGATAAATATTGC
CAAAATATACAGAAAAAAACTGTCATAATAATTGACCAAGCTTCCATTCATACCAGCGAGGCATTTATGGAGAAACTTGAGGAATGGGAAAAGAAAAACT
TGAAAATATTTTGGTTGCCCACTTATTCACCTCATTTAAATTTAATTGAAATATTATGGAGATTTTTAAAATATGAATGGATTGAATTTAGCGCCTATAA
AGACCGAAAGAGCCTCCTCGCTTACGTTAAAAAAGTGCTGGACAATTTTGGAGGCGAGTATGTAATTAATTTTGCCTAGGTACT
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
999 bp | 332 aa | 81 | 1079 | + | No |
Chemistry : DDE
ORF sequence :
MRLIRDLNPESQKMLERIYRASKHHQVRERAKCILLSFQGTTIEELSGIFGVTRKTIYNWLTAWEDRKLIGFYNRRGRGRKPKLTEAQGQQVIDWVKEEP
KSLKKIQIKIVEEGKLTVSKDTIKRLIKKINMRWKRVRRGVAKTPDEWELEVKLPILEELKKQEKRGEIEIGYLDEMGGDSKPCIPDAWQEEKTTIKLPP
IEGKRLNILGIMKRDNQLFYETQVGTVTSEIVINFLDKYCQNIQKKTVIIIDQASIHTSEAFMEKLEEWEKKNLKIFWLPTYSPHLNLIEILWRFLKYEW
IEFSAYKDRKSLLAYVKKVLDNFGGEYVINFA
KSLKKIQIKIVEEGKLTVSKDTIKRLIKKINMRWKRVRRGVAKTPDEWELEVKLPILEELKKQEKRGEIEIGYLDEMGGDSKPCIPDAWQEEKTTIKLPP
IEGKRLNILGIMKRDNQLFYETQVGTVTSEIVINFLDKYCQNIQKKTVIIIDQASIHTSEAFMEKLEEWEKKNLKIFWLPTYSPHLNLIEILWRFLKYEW
IEFSAYKDRKSLLAYVKKVLDNFGGEYVINFA
Blast result :
Comments
ISMae24 is 67% aa similar to ISAcma15.
References
1] Modified and submitted by ISfinder (2010)
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.