ISMae37
- Family ISL3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_010296 | ND | Microcystis aeruginosa | Microcystis aeruginosa NIES-843 |
DNA section
IS Length : 1245 bp
Ends
IR Length : 19/22
IRL : GGCTCTTCTAGGTTCTGTGTGAGCATGGTATAATAGTAACACAGAACAGG
IRR : GGCTCTTCTGGTTTTCGTGTGTTAATTTTTGTTATGAATTAAAGCAAGCA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TTCGGCAGAA | AAGGGTC | TATATTCTTC | 7 |
CTACTGACTC | CTAACCC | TAAGAACAAT | 7 |
CGCTATCGTC | GATTTAG | ACTTACAAAA | 7 |
DNA sequence
GGCTCTTCTAGGTTCTGTGTGAGCATGGTATAATAGTAACACAGAACAGGAGGTGGGTTATGTGGATAAATTTTGATCAACTCCTCGATTTACCAAATGT
AACAGTGGTCAATTATCAAAAAATTGATGAGACAATTTTCCTAAAGCTCGCTCTTTTAAATGAAACAATTGAATGTCCGAATTGCCATCAAACCTTGGAC
AGAATCAATCAGACAGAGTATAATCTAGTCAGAGATTTGTCAATATTAGGCAATCGAGTATATTTGGAAGTACCACGCCGCCAGTTTCATTGTCAAAAGT
GCCAAAAGTATATCAGCGAAAGACTAAGTTTTATGAGATTAAGACAGCATCATACAATTCGCTATGAATCGATGATTTATGAGAGAGTAAAAAATTGTAG
TATCGAAGAAATAAGTCGAGAAGAAGGGTTAGGATGGTCAGAAGTTGAGTTAATATTTAATCACTGTGCTAAAGAACTAGAAAAGGAAGAGTGGGAAGCA
CCAGAACGAATAAGCTTAGATGAATTTAGTAACTTAAAAGGACACAAAGATTTCATAACAACGGTCGTAGATCTGGACAAGAAAATTTTACTAGATGTGA
TTAAAGGACATAAGCAAGAAGAATTAATGGAAGCCTTAAAAGCACAGCCAGAGGCAGTTCGGGAGAAGGTGAAAGAAGTGAGCGTCGATATGTGGTCAGG
ATTTACAGCAGTGATCAAGGAATTATTTCCTAATGCTAAAATCATCTATGATCGTTTTCATGTAATGGCTATCATCAATGACGAGCTTAATAAATTGAGA
AAATTAATGGGGGTGCATGAAAAAGGATTACCTCATTTATTATGGAAGAATAAAGAGGACTTAAAAGACGAGCAAAAACAACAACTAGAAGTTATCCTGA
AAGAACATCCCTGCTTGGGAATAGCCTGGGAAATGAAAGAAGAAATTAGACAAATTTATCAAAGTAGTAGAACGTTCAGAGGTGCTGAGAGAAAATTGGA
AAAATGGATAAGAATAGGCGGAATATTATATGAAAGTGGTGCCAGCATGATCCAGAAGCATTTGCAGGGTATTTGTAATTACTTTGAAAATCATACAACC
AACGGATTAATTGAGGGAATGAATACCAAAATAAAGCTTATTAAAAGAATGAGTTATGGATTTACCAATTTTCAACATCTTCGACTTAAGCTGTTTGCTT
GCTTTAATTCATAACAAAAATTAACACACGAAAACCAGAAGAGCC
AACAGTGGTCAATTATCAAAAAATTGATGAGACAATTTTCCTAAAGCTCGCTCTTTTAAATGAAACAATTGAATGTCCGAATTGCCATCAAACCTTGGAC
AGAATCAATCAGACAGAGTATAATCTAGTCAGAGATTTGTCAATATTAGGCAATCGAGTATATTTGGAAGTACCACGCCGCCAGTTTCATTGTCAAAAGT
GCCAAAAGTATATCAGCGAAAGACTAAGTTTTATGAGATTAAGACAGCATCATACAATTCGCTATGAATCGATGATTTATGAGAGAGTAAAAAATTGTAG
TATCGAAGAAATAAGTCGAGAAGAAGGGTTAGGATGGTCAGAAGTTGAGTTAATATTTAATCACTGTGCTAAAGAACTAGAAAAGGAAGAGTGGGAAGCA
CCAGAACGAATAAGCTTAGATGAATTTAGTAACTTAAAAGGACACAAAGATTTCATAACAACGGTCGTAGATCTGGACAAGAAAATTTTACTAGATGTGA
TTAAAGGACATAAGCAAGAAGAATTAATGGAAGCCTTAAAAGCACAGCCAGAGGCAGTTCGGGAGAAGGTGAAAGAAGTGAGCGTCGATATGTGGTCAGG
ATTTACAGCAGTGATCAAGGAATTATTTCCTAATGCTAAAATCATCTATGATCGTTTTCATGTAATGGCTATCATCAATGACGAGCTTAATAAATTGAGA
AAATTAATGGGGGTGCATGAAAAAGGATTACCTCATTTATTATGGAAGAATAAAGAGGACTTAAAAGACGAGCAAAAACAACAACTAGAAGTTATCCTGA
AAGAACATCCCTGCTTGGGAATAGCCTGGGAAATGAAAGAAGAAATTAGACAAATTTATCAAAGTAGTAGAACGTTCAGAGGTGCTGAGAGAAAATTGGA
AAAATGGATAAGAATAGGCGGAATATTATATGAAAGTGGTGCCAGCATGATCCAGAAGCATTTGCAGGGTATTTGTAATTACTTTGAAAATCATACAACC
AACGGATTAATTGAGGGAATGAATACCAAAATAAAGCTTATTAAAAGAATGAGTTATGGATTTACCAATTTTCAACATCTTCGACTTAAGCTGTTTGCTT
GCTTTAATTCATAACAAAAATTAACACACGAAAACCAGAAGAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1155 bp | 384 aa | 60 | 1214 | + | No |
Chemistry : Unknow
ORF sequence :
MWINFDQLLDLPNVTVVNYQKIDETIFLKLALLNETIECPNCHQTLDRINQTEYNLVRDLSILGNRVYLEVPRRQFHCQKCQKYISERLSFMRLRQHHTI
RYESMIYERVKNCSIEEISREEGLGWSEVELIFNHCAKELEKEEWEAPERISLDEFSNLKGHKDFITTVVDLDKKILLDVIKGHKQEELMEALKAQPEAV
REKVKEVSVDMWSGFTAVIKELFPNAKIIYDRFHVMAIINDELNKLRKLMGVHEKGLPHLLWKNKEDLKDEQKQQLEVILKEHPCLGIAWEMKEEIRQIY
QSSRTFRGAERKLEKWIRIGGILYESGASMIQKHLQGICNYFENHTTNGLIEGMNTKIKLIKRMSYGFTNFQHLRLKLFACFNS
RYESMIYERVKNCSIEEISREEGLGWSEVELIFNHCAKELEKEEWEAPERISLDEFSNLKGHKDFITTVVDLDKKILLDVIKGHKQEELMEALKAQPEAV
REKVKEVSVDMWSGFTAVIKELFPNAKIIYDRFHVMAIINDELNKLRKLMGVHEKGLPHLLWKNKEDLKDEQKQQLEVILKEHPCLGIAWEMKEEIRQIY
QSSRTFRGAERKLEKWIRIGGILYESGASMIQKHLQGICNYFENHTTNGLIEGMNTKIKLIKRMSYGFTNFQHLRLKLFACFNS
Blast result :
Comments
ISMae37 is 54% aa similar to ISAsp1.
References
1] Modified and submitted by ISfinder (2010)
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.