ISMae22
- Family IS630
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_010296 | ND | Microcystis aeruginosa | Microcystis aeruginosa NIES-843 |
DNA section
IS Length : 1138 bp
Ends
IR Length : 21/32
IRL : TACTTTGCACGGCTACAACTTGCATTTTTTACTCAAGGACAATAATATAG
IRR : TACTTTAGACGTTCATAATCTGAGATTTATTAAACTTCTGAAATCGTAGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TTACCGCCTT | TA | GCTCGATTTA | 2 |
GGCCGGAAAC | TA | GAAAAGTAAT | 2 |
GAAGAACAAC | TA | ACCTTTAGCT | 2 |
AATGTCGAGA | TA | GAAGACCGTT | 2 |
DNA sequence
TACTTTGCACGGCTACAACTTGCATTTTTTACTCAAGGACAATAATATAGTTTAAGAGTCATAATTAGAAGCAAAGCACTCATTAAAAACATGATTAACC
TAGAATTCACGGAAGAAGAAAAGAACTCACTGTATTATGAAAGATTTCATCATCCCCATCCCCGGGTTCAACTGAAGATGGAAGTTCTCTGGTTAAAAAG
CCAAAAGATACCGCACCAAAAAATTTGTCAGTTAGCAGGAATCTCGCCAAATACCTTATTAACCTATCTTCGAGATTATCAAGAGGGCGGAATAGAAAAA
TTAAAAGAAATCAACTTCTATCGCCCTAAAAGTGAATTAGAGTCTCAAAGAGAAACGCTCAAAAAATATTTCGAGAAAAATCCACCAGCCACAATAAATG
AAGCTGTATATAGAAGAGAAGAATTGACAGGAATAAAACGAAGTCCTACCCAAGTGAGAAAATTCTTAAAATCCTTGGGAATGAAATGTTTAAAAATAGG
TTCTCTTCCTTCTAAAGCTGACCCAGATGAACAAGAAGAATACAAAGAAAAAAAGCTAGAACCCAGACTAAATGAGGCTAAAGAAGGAAAAAGGGCTGTT
TTTTTTGTTGATGCCGCTCACTTCGTCATGGGAGCATTTCTCGGTTTTGTTTGGTGTTTTGAGAGACTTTTTGTTAAGTCACCGAGCGGGCGTAAACGCT
TCAATGTTTTAGGAGCATTAAATGCAATAACTCATGAAGTTATTCTGGTTACGAATGACACTTATATTACGGCAACTCAAGTCTGTGAACTCCGGTCAAA
AATAGCTGCTTTAGGACTAATGATTCCCATCACTCTAGTCTTAGATAATGCCCGCTATCAAAAATGTCAAATTGTTGAAGAATTAGCTCTTTCTTTGTCA
ATAGAACTGCTCTATCTGCCGTCTTATTCACCTAATCTAAATTTAATTGAAAGGCTGTGGAAATTTGTCAAAAAGAAATGTTTATATGGTAAATATTATG
AAAACTTTTCTGACTTTTCTTCAGCCATTTATGAATGTTTGAATGATGCCCATTTGAAACATAAAAAAGAACTGGATTCCTTGCTGACTCTACGATTTCA
GAAGTTTAATAAATCTCAGATTATGAACGTCTAAAGTA
TAGAATTCACGGAAGAAGAAAAGAACTCACTGTATTATGAAAGATTTCATCATCCCCATCCCCGGGTTCAACTGAAGATGGAAGTTCTCTGGTTAAAAAG
CCAAAAGATACCGCACCAAAAAATTTGTCAGTTAGCAGGAATCTCGCCAAATACCTTATTAACCTATCTTCGAGATTATCAAGAGGGCGGAATAGAAAAA
TTAAAAGAAATCAACTTCTATCGCCCTAAAAGTGAATTAGAGTCTCAAAGAGAAACGCTCAAAAAATATTTCGAGAAAAATCCACCAGCCACAATAAATG
AAGCTGTATATAGAAGAGAAGAATTGACAGGAATAAAACGAAGTCCTACCCAAGTGAGAAAATTCTTAAAATCCTTGGGAATGAAATGTTTAAAAATAGG
TTCTCTTCCTTCTAAAGCTGACCCAGATGAACAAGAAGAATACAAAGAAAAAAAGCTAGAACCCAGACTAAATGAGGCTAAAGAAGGAAAAAGGGCTGTT
TTTTTTGTTGATGCCGCTCACTTCGTCATGGGAGCATTTCTCGGTTTTGTTTGGTGTTTTGAGAGACTTTTTGTTAAGTCACCGAGCGGGCGTAAACGCT
TCAATGTTTTAGGAGCATTAAATGCAATAACTCATGAAGTTATTCTGGTTACGAATGACACTTATATTACGGCAACTCAAGTCTGTGAACTCCGGTCAAA
AATAGCTGCTTTAGGACTAATGATTCCCATCACTCTAGTCTTAGATAATGCCCGCTATCAAAAATGTCAAATTGTTGAAGAATTAGCTCTTTCTTTGTCA
ATAGAACTGCTCTATCTGCCGTCTTATTCACCTAATCTAAATTTAATTGAAAGGCTGTGGAAATTTGTCAAAAAGAAATGTTTATATGGTAAATATTATG
AAAACTTTTCTGACTTTTCTTCAGCCATTTATGAATGTTTGAATGATGCCCATTTGAAACATAAAAAAGAACTGGATTCCTTGCTGACTCTACGATTTCA
GAAGTTTAATAAATCTCAGATTATGAACGTCTAAAGTA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1044 bp | 347 aa | 91 | 1134 | + | No |
Chemistry : DDE
ORF sequence :
MINLEFTEEEKNSLYYERFHHPHPRVQLKMEVLWLKSQKIPHQKICQLAGISPNTLLTYLRDYQEGGIEKLKEINFYRPKSELESQRETLKKYFEKNPPA
TINEAVYRREELTGIKRSPTQVRKFLKSLGMKCLKIGSLPSKADPDEQEEYKEKKLEPRLNEAKEGKRAVFFVDAAHFVMGAFLGFVWCFERLFVKSPSG
RKRFNVLGALNAITHEVILVTNDTYITATQVCELRSKIAALGLMIPITLVLDNARYQKCQIVEELALSLSIELLYLPSYSPNLNLIERLWKFVKKKCLYG
KYYENFSDFSSAIYECLNDAHLKHKKELDSLLTLRFQKFNKSQIMNV
TINEAVYRREELTGIKRSPTQVRKFLKSLGMKCLKIGSLPSKADPDEQEEYKEKKLEPRLNEAKEGKRAVFFVDAAHFVMGAFLGFVWCFERLFVKSPSG
RKRFNVLGALNAITHEVILVTNDTYITATQVCELRSKIAALGLMIPITLVLDNARYQKCQIVEELALSLSIELLYLPSYSPNLNLIERLWKFVKKKCLYG
KYYENFSDFSSAIYECLNDAHLKHKKELDSLLTLRFQKFNKSQIMNV
Blast result :
Comments
ISMae22 is 73% aa similar to ISAcma41.
References
1] Modified and submitted by ISfinder (2010)
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.