ISMae21
- Family IS630
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_010296 | ND | Microcystis aeruginosa | Microcystis aeruginosa NIES-843 |
DNA section
IS Length : 950 bp
Ends
IR Length : 21/25
IRL : TAGTCATTTCAAATAAGTGTGAGACGAGGGAAAAATAAGGTAAAATCAAG
IRR : TAGTTATTTCAAATAAGAACGAGACACTAGGCGACACAATAAGTACGAAT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AGTAATCAAT | TA | AGACTTTGGT | 2 |
CCAACCAAGT | TA | AATAGTGAAC | 2 |
CTGTTCCTAT | TA | ATTTGGCTAG | 2 |
DNA sequence
TAGTCATTTCAAATAAGTGTGAGACGAGGGAAAAATAAGGTAAAATCAAGAGAAACGAGCAACCCATACAGAAAAATGTCTTATAGCCTAGACTTGAGAA
AAAAAGTAATCGATTATGTAGAGAATGGGGGAAGCATAACCAAAGCCGCCGCTCTATTTAATATAGGAAGAGCGACGATATATAGATGGCTAGGTAGGGA
AAAACTGGAAGCAACAAAGGTAAAACACCGTCAGAGAAAGCTGGACTGGAAAGCACTGTCAAAAGATGTCCAAGAAAATCCCGAGGCAAGATTAAGAGAC
AGAGCCGAGAAATTTGGAGTGAGACCAAGTGCCATTTGCTATGCCTTAAAAAACATGAAAGTTACCAGAAAAAAGAAGGAACTTCGTTATAGAGAAAGAA
ACCGAGAAGAAAGAATGAAATACTACAGAGTGCTGAGAGAATTGATTAAAATATATGGAAGTGAAAGCCTTGTATTTATTGATGAGTCAGGGTTTGAAGA
ATTTCAAGCCTGTTTTTATGCTTGGTCAAAAAAAGGGAAGAAAGTCTTTGGAGATAGACAAGGAAAACGAGGAAAAAGAGAGAACCTTGTCGCTGGTAGA
AGAAAGGGAAAAAAAGACTTTATTGCACCGATGGTATTTACGAGAAGCCTGAATGCCGAAGGTTTTGAAGGGTGGTTATCTTTATATTTGTTGCCCTCTC
TAACCATAACATCAGTATTAATTATGGATAATGCACCAATTCATCGGAAGACAGTCATTAAACAACTGGTAGAGGAAGCAGGTCATCAGGTCGTGTTTTT
GCCAAAATACTCTCCTGATTTAAATGATATCGAACATGATTTTAGTGCATTAAAGAGGGCAAGAATGTATGCTCCTGTGGGGACACCCCTTGATGAAATT
ATTCGTACTTATTGTGTCGCCTAGTGTCTCGTTCTTATTTGAAATAACTA
AAAAAGTAATCGATTATGTAGAGAATGGGGGAAGCATAACCAAAGCCGCCGCTCTATTTAATATAGGAAGAGCGACGATATATAGATGGCTAGGTAGGGA
AAAACTGGAAGCAACAAAGGTAAAACACCGTCAGAGAAAGCTGGACTGGAAAGCACTGTCAAAAGATGTCCAAGAAAATCCCGAGGCAAGATTAAGAGAC
AGAGCCGAGAAATTTGGAGTGAGACCAAGTGCCATTTGCTATGCCTTAAAAAACATGAAAGTTACCAGAAAAAAGAAGGAACTTCGTTATAGAGAAAGAA
ACCGAGAAGAAAGAATGAAATACTACAGAGTGCTGAGAGAATTGATTAAAATATATGGAAGTGAAAGCCTTGTATTTATTGATGAGTCAGGGTTTGAAGA
ATTTCAAGCCTGTTTTTATGCTTGGTCAAAAAAAGGGAAGAAAGTCTTTGGAGATAGACAAGGAAAACGAGGAAAAAGAGAGAACCTTGTCGCTGGTAGA
AGAAAGGGAAAAAAAGACTTTATTGCACCGATGGTATTTACGAGAAGCCTGAATGCCGAAGGTTTTGAAGGGTGGTTATCTTTATATTTGTTGCCCTCTC
TAACCATAACATCAGTATTAATTATGGATAATGCACCAATTCATCGGAAGACAGTCATTAAACAACTGGTAGAGGAAGCAGGTCATCAGGTCGTGTTTTT
GCCAAAATACTCTCCTGATTTAAATGATATCGAACATGATTTTAGTGCATTAAAGAGGGCAAGAATGTATGCTCCTGTGGGGACACCCCTTGATGAAATT
ATTCGTACTTATTGTGTCGCCTAGTGTCTCGTTCTTATTTGAAATAACTA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
849 bp | 282 aa | 76 | 924 | + | No |
Chemistry : DDE
ORF sequence :
MSYSLDLRKKVIDYVENGGSITKAAALFNIGRATIYRWLGREKLEATKVKHRQRKLDWKALSKDVQENPEARLRDRAEKFGVRPSAICYALKNMKVTRKK
KELRYRERNREERMKYYRVLRELIKIYGSESLVFIDESGFEEFQACFYAWSKKGKKVFGDRQGKRGKRENLVAGRRKGKKDFIAPMVFTRSLNAEGFEGW
LSLYLLPSLTITSVLIMDNAPIHRKTVIKQLVEEAGHQVVFLPKYSPDLNDIEHDFSALKRARMYAPVGTPLDEIIRTYCVA
KELRYRERNREERMKYYRVLRELIKIYGSESLVFIDESGFEEFQACFYAWSKKGKKVFGDRQGKRGKRENLVAGRRKGKKDFIAPMVFTRSLNAEGFEGW
LSLYLLPSLTITSVLIMDNAPIHRKTVIKQLVEEAGHQVVFLPKYSPDLNDIEHDFSALKRARMYAPVGTPLDEIIRTYCVA
Blast result :
Comments
ISMae21 is 88% aa similar to ISTcSa.
References
1] Modified and submitted by ISfinder (2010)
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.