ISMae6
- Family IS5
- Group IS5
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_010296 | ND | Microcystis aeruginosa | Microcystis aeruginosa NIES-843 |
DNA section
IS Length : 1682 bp
Ends
IR Length : 16/18
IRL : GGGTTTGCTGAATAAATCTAAAAACCTTACAGGAAAGGGCTTTTAGCTTG
IRR : GGGTTTGCTGAAAAAGTCATTGAAAAGTACAGGTCTCTTAATCAATGATT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GATTGTTAAG | TAGGTA | GGCGTTAAAA | 6 |
ATCAAAAAAA | TATTTA | GAATCCCTCC | 6 |
AGTGATGAGT | TAGGTA | GTTATCCAGT | 6 |
TCCATAGGGC | TAATTA | CAAACTGAGC | 6 |
GACAGTAGCC | TAGTTA | CTCAGGAGCC | 6 |
TGGCAACCCC | TAAATA | GCGAGACCGC | 6 |
GAATCAACCC | TACTATA | GACCTCTTGC | 7 |
DNA sequence
GGGTTTGCTGAATAAATCTAAAAACCTTACAGGAAAGGGCTTTTAGCTTGATTGAGAGCTTCCCAAATGCACTTAAATCTGCTAGAATCTCTTAAAACCC
TTGCATCACCCTTGCATCTTCTCTAATTAGTGCTAATGTACCGTAAAAGCGAGTTACCCTCAACCCCACCAGAAAACTTCGAGCTGCCCTTTGAGGGGAA
ATTATCCCAAGATAATCGTTGGGTAATTATGGCCAACCTCATTCCCTGGTCAGAATTTGAAGCGGAATACGCATCACTTTTTTCAGAAGAAATGGGCGCA
CCCGCCAAAACATTTAGGACAGCACTAGGAGCATTAATTATTAAAGAAAAATTAGGAACAAGCGATAGAGAAACGGTAGAACAAATCAAGGAAAATCCTT
ATTTACAATACTTCTTGGGGTTTTCAGCCTACAGCAATGAACCCCAGTTTGAAGCGTCAATGTTGGTTCACTTTCGAGAAAGAATCACTCGGGAACTAAT
TAATAAAGTGAATCGCTTTATGGTCAAAAATTCGAGAGAAATAAAAGAAGAAGAAAACACCGAAAAAAAGTTAGAGAGCGAAACCCAAAGTCAACCAGAA
AATCGAGGTAAATTAATTTTAGATGCCAGTTGTGCGCCCGCAGATATTAGTTATCCTACGGATTTAAACCTGTTAAATCAAGGAAGAAAACAAACCGAAA
AAATTATTGATATTCTCTATGAAACTATAAAAGGAAAACTTGTTCAAAAACCGAGAACCTATCGTCTCCTGGCCAGAAAAAGTTATTTAGAAGTAGCAAA
AAAAAGAAAACCTACCGTCAAACAAAGACGAAAAGCTCTAAAAAGACAACTGCAATATCTGAAAAGAAATCTCGACCATATTGAACAACTTTTAGCAGAA
GGAGCCTCTCTACAAAGCTTGAAAAAAAGAGACTATAAACTGTTATTAGTAGTCACAGAAGTTTATCGCCAACAACTCTGGATGTACCAAAATAACAAAC
AGAGTATTGAAGACAGAATTGTCAGCTTAACTCAACCCCACATCCGTCCGATAGTCAGAGGAAAAGCTGGAAAACCCGTAGAATTTGGGGCCAAATTCTC
AGCAAGCTGTATAGATGGTTACATATTTTTAGACCGGATTAGTTGGGATAACTTTAATGAATCGGGAGATTTAAAAGCACAAATAGAAGCTTATTATGAC
TATACAGGATACTATCCAGAATCAGTTCATGTGGACAAAATTTATCGAACCAGAGAAAACCGAGCTTGGTGTAAAGAAAGGGGAATCAGAATCAGTGGTC
CCCCATTAGGAAGACCAGCCAAAAATGTTAGTAAAGAACAAAAGAAACAAGCTACTGATGATGAGAGGATTCGGAATTGTATAGAGGGCAAATTTGGACA
AGGGAAAAGAAGATTTAGCTTAGGTAAAGTGATGGCTAAACTTCCTCATACTTCCTTTTCAGCGATTGCTATTACTTTTTTAGTCATGAATCTTTCTAAC
CTGTTGAGGCAGGTTTTTTGGGCTTTTTTATGTCTGAAATGGAAAAACAGCACTTTTTCTCGGTCAATGATTAGGATAAGTTATAATTTAAAAATTAATC
AACAACTAAAGCTTATGCTTGTAGCTAAGTGAAATCATTGATTAAGAGACCTGTACTTTTCAATGACTTTTTCAGCAAACCC
TTGCATCACCCTTGCATCTTCTCTAATTAGTGCTAATGTACCGTAAAAGCGAGTTACCCTCAACCCCACCAGAAAACTTCGAGCTGCCCTTTGAGGGGAA
ATTATCCCAAGATAATCGTTGGGTAATTATGGCCAACCTCATTCCCTGGTCAGAATTTGAAGCGGAATACGCATCACTTTTTTCAGAAGAAATGGGCGCA
CCCGCCAAAACATTTAGGACAGCACTAGGAGCATTAATTATTAAAGAAAAATTAGGAACAAGCGATAGAGAAACGGTAGAACAAATCAAGGAAAATCCTT
ATTTACAATACTTCTTGGGGTTTTCAGCCTACAGCAATGAACCCCAGTTTGAAGCGTCAATGTTGGTTCACTTTCGAGAAAGAATCACTCGGGAACTAAT
TAATAAAGTGAATCGCTTTATGGTCAAAAATTCGAGAGAAATAAAAGAAGAAGAAAACACCGAAAAAAAGTTAGAGAGCGAAACCCAAAGTCAACCAGAA
AATCGAGGTAAATTAATTTTAGATGCCAGTTGTGCGCCCGCAGATATTAGTTATCCTACGGATTTAAACCTGTTAAATCAAGGAAGAAAACAAACCGAAA
AAATTATTGATATTCTCTATGAAACTATAAAAGGAAAACTTGTTCAAAAACCGAGAACCTATCGTCTCCTGGCCAGAAAAAGTTATTTAGAAGTAGCAAA
AAAAAGAAAACCTACCGTCAAACAAAGACGAAAAGCTCTAAAAAGACAACTGCAATATCTGAAAAGAAATCTCGACCATATTGAACAACTTTTAGCAGAA
GGAGCCTCTCTACAAAGCTTGAAAAAAAGAGACTATAAACTGTTATTAGTAGTCACAGAAGTTTATCGCCAACAACTCTGGATGTACCAAAATAACAAAC
AGAGTATTGAAGACAGAATTGTCAGCTTAACTCAACCCCACATCCGTCCGATAGTCAGAGGAAAAGCTGGAAAACCCGTAGAATTTGGGGCCAAATTCTC
AGCAAGCTGTATAGATGGTTACATATTTTTAGACCGGATTAGTTGGGATAACTTTAATGAATCGGGAGATTTAAAAGCACAAATAGAAGCTTATTATGAC
TATACAGGATACTATCCAGAATCAGTTCATGTGGACAAAATTTATCGAACCAGAGAAAACCGAGCTTGGTGTAAAGAAAGGGGAATCAGAATCAGTGGTC
CCCCATTAGGAAGACCAGCCAAAAATGTTAGTAAAGAACAAAAGAAACAAGCTACTGATGATGAGAGGATTCGGAATTGTATAGAGGGCAAATTTGGACA
AGGGAAAAGAAGATTTAGCTTAGGTAAAGTGATGGCTAAACTTCCTCATACTTCCTTTTCAGCGATTGCTATTACTTTTTTAGTCATGAATCTTTCTAAC
CTGTTGAGGCAGGTTTTTTGGGCTTTTTTATGTCTGAAATGGAAAAACAGCACTTTTTCTCGGTCAATGATTAGGATAAGTTATAATTTAAAAATTAATC
AACAACTAAAGCTTATGCTTGTAGCTAAGTGAAATCATTGATTAAGAGACCTGTACTTTTCAATGACTTTTTCAGCAAACCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1497 bp | 498 aa | 136 | 1632 | + | No |
Chemistry : DDE
ORF sequence :
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGAPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSAYS
NEPQFEASMLVHFRERITRELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETIKG
KLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQ
PHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSK
EQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
NEPQFEASMLVHFRERITRELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETIKG
KLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQ
PHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSK
EQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
Blast result :
Comments
ISMae6 is 71% aa similar to ISAcma17.
References
1] ISfinder annnotation (2010)
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.