ISMae10
- Family IS1634
- Group
Isoform Synonym(s) ISMae31
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_010296 | ND | Microcystis aeruginosa | Microcystis aeruginosa NIES-843 |
DNA section
IS Length : 2073 bp
Ends
IR Length : 27/28
IRL : CCCACATTCCGCACCCTCAACTGTCACATAAGCTGTCCCCCTCCAGAGAC
IRR : CCCACATTCCGCACCCTAAGTGTCACAACGTCTCAAAAGAGGAAGGGGCG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CATTCGTCCT | CTTTAA | GGGGGAATAA | 6 |
DNA sequence
CCCACATTCCGCACCCTCAACTGTCACATAAGCTGTCCCCCTCCAGAGACTTGAGTAAAAATACTTAGCTGGTGAAGGTTTTCTCGGTGGCCGCTAGGGG
GGCTTTGAGACCCTAATTATGAAAAAATAGGAATTGTTGGAAAACTGAGGCGAGTGGGCTGTTCGACCATGAATCAATCAACAGAAATTGAAGTCAAAAA
TCTAGACCATCTGGGATTAGTAGCCGGAATTATCGATGAAATAGGAATCGTTGAAATTATCAACGAACAAGTCTCAATTGAGCGAGGAGAAATTGTCACA
GCGGGGCAAGTCGTGAAAGCAATTATCCTGAATGGATTGGGATTTGTCTCCCGAGCCTTGTATTTATTTCCTCAATTTTTTGAAGATAAAGCAACCGAAC
ATTTGCTGGGAGAGGGCATCGAACCAAAACACCTGAATGATGATAAAATTGGTCGAGTAATGGACAAACTTTATCAACTTAATGTTTCGGTCATTTTCCT
ACGGATTAGTTTAGCGGCCGTGAAAAAATTTGGTGTAGCAACCGAGAACTCCCATTTAGATTCGACTTCTCTATCAGTAGAAGGAGAATATAAAAAGGAA
TACCCAACAGTAGAAATCCTGAAATCAGGAGCAGTGGGAGAAGAAATTGAAACCAGACAACAGCCAATAAAAATTACCTACGGATACTCCCGCGACCGAA
GACCTGACTTAAAACAATTTATGATTGACTTAATCGTAAGTGGGGATGGAGATGTACCTTTATTCCTGAAAGTAGGGGACGGAAATGAAGCGGACAAAGC
GGTTTTTGGTCAAATCGCCCGAGAATTTAAAAAACAAGTTGACTTTGACAGTTTAATAGTCGGCGATAGCGCCCTCTATAGCAAAGAGAATTTAAAACTA
ATGAAAGAAATGCGTTGGTTGTCTCGAGTACCATTAAGCATTAAAGAGGCTCAAGAGTTAGTCGATAGCATCTCAGAAAAAGAGTTAACCGATTCAGAAA
TACCGGGTTATTCCTGGCGGGAAACCATCTCTAACTATGGGGGGATAGAACAAAGATGGTTGCTAGTTGAAAGTCAAGCTAGACAAGAATCAGACTTGAA
AAAATTAGAGAAAAAAATCGAGCAGGAAAAGAAAACAGCCCAAGAAAAAATCCGGCAACTATCCCGAAGAGAATTTGAGAATAGAGCGGTGGCGTTGGCG
ATAGTCAAAGGATTATCTGACTCCTTAAAATATCATCAGTTAACGGAGATTAAAGTCAATCTCATTCCGCCTGAGTCTCAGCAGTCAAAACTCAAATCAA
AAGACGATTTACCCTCTCAAAGCTATCAAGTTCAAGCCGAATTAGAGTTGAATTTGGCAGCGATTGAGAGGCTCAAGAAACGAGCAGGACGATTCGTTTT
AGCAACTAACAATTTGGAGAAAAAACGATTAAGCAGTGAGGATATACTCAAAAAATATAAGGGGCAACAAGCTCCAGAAAGAGGATTTTCTTTTCTCAAA
GACCCCTGCTTTTTTGCCCACAGTGTCTTTCTCAAATCTCCCCATAGAATCGAGGTCATGGCCATGCTCATGGGCTTGTGCCTGTTGGTTTATACTATTG
GTCAAAGACAACTTCGTCTGAATTTAAAACAGCAGGAGACGGGACTGAAAAATCAGTTGGGTAAGTTAACTGACCGACCAACATTACGCTGGATATTTCA
GAACTTTCAAGGGATTCATCTCCTACGTATTCAAGACAATCAAAAGATTAGCAACTTAACGGATGAGAGGCGCAACATTTTGAGATTTTTTCCCAAACCT
TGCCAAGAATATTATCTCTTATCTTGACCAGATGGATTGACTTCAAGGGGTGACAAAACAAAGCGAGCAACTGGAACATCTCCCCCTAGATGTTAAGTCT
GATTGACCGGTCATTCTCAACAAGCACTGTTTATTGAGAATGACCGGGGGAACTCTGAAATTTTCGGCTTAGTTGCCGGCAGCTTGCCGCCAACTCACTC
CTCTAGATAAGTATTTTGACTCGCGCCCCTTCCTCTTTTGAGACGTTGTGACACTTAGGGTGCGGAATGTGGG
GGCTTTGAGACCCTAATTATGAAAAAATAGGAATTGTTGGAAAACTGAGGCGAGTGGGCTGTTCGACCATGAATCAATCAACAGAAATTGAAGTCAAAAA
TCTAGACCATCTGGGATTAGTAGCCGGAATTATCGATGAAATAGGAATCGTTGAAATTATCAACGAACAAGTCTCAATTGAGCGAGGAGAAATTGTCACA
GCGGGGCAAGTCGTGAAAGCAATTATCCTGAATGGATTGGGATTTGTCTCCCGAGCCTTGTATTTATTTCCTCAATTTTTTGAAGATAAAGCAACCGAAC
ATTTGCTGGGAGAGGGCATCGAACCAAAACACCTGAATGATGATAAAATTGGTCGAGTAATGGACAAACTTTATCAACTTAATGTTTCGGTCATTTTCCT
ACGGATTAGTTTAGCGGCCGTGAAAAAATTTGGTGTAGCAACCGAGAACTCCCATTTAGATTCGACTTCTCTATCAGTAGAAGGAGAATATAAAAAGGAA
TACCCAACAGTAGAAATCCTGAAATCAGGAGCAGTGGGAGAAGAAATTGAAACCAGACAACAGCCAATAAAAATTACCTACGGATACTCCCGCGACCGAA
GACCTGACTTAAAACAATTTATGATTGACTTAATCGTAAGTGGGGATGGAGATGTACCTTTATTCCTGAAAGTAGGGGACGGAAATGAAGCGGACAAAGC
GGTTTTTGGTCAAATCGCCCGAGAATTTAAAAAACAAGTTGACTTTGACAGTTTAATAGTCGGCGATAGCGCCCTCTATAGCAAAGAGAATTTAAAACTA
ATGAAAGAAATGCGTTGGTTGTCTCGAGTACCATTAAGCATTAAAGAGGCTCAAGAGTTAGTCGATAGCATCTCAGAAAAAGAGTTAACCGATTCAGAAA
TACCGGGTTATTCCTGGCGGGAAACCATCTCTAACTATGGGGGGATAGAACAAAGATGGTTGCTAGTTGAAAGTCAAGCTAGACAAGAATCAGACTTGAA
AAAATTAGAGAAAAAAATCGAGCAGGAAAAGAAAACAGCCCAAGAAAAAATCCGGCAACTATCCCGAAGAGAATTTGAGAATAGAGCGGTGGCGTTGGCG
ATAGTCAAAGGATTATCTGACTCCTTAAAATATCATCAGTTAACGGAGATTAAAGTCAATCTCATTCCGCCTGAGTCTCAGCAGTCAAAACTCAAATCAA
AAGACGATTTACCCTCTCAAAGCTATCAAGTTCAAGCCGAATTAGAGTTGAATTTGGCAGCGATTGAGAGGCTCAAGAAACGAGCAGGACGATTCGTTTT
AGCAACTAACAATTTGGAGAAAAAACGATTAAGCAGTGAGGATATACTCAAAAAATATAAGGGGCAACAAGCTCCAGAAAGAGGATTTTCTTTTCTCAAA
GACCCCTGCTTTTTTGCCCACAGTGTCTTTCTCAAATCTCCCCATAGAATCGAGGTCATGGCCATGCTCATGGGCTTGTGCCTGTTGGTTTATACTATTG
GTCAAAGACAACTTCGTCTGAATTTAAAACAGCAGGAGACGGGACTGAAAAATCAGTTGGGTAAGTTAACTGACCGACCAACATTACGCTGGATATTTCA
GAACTTTCAAGGGATTCATCTCCTACGTATTCAAGACAATCAAAAGATTAGCAACTTAACGGATGAGAGGCGCAACATTTTGAGATTTTTTCCCAAACCT
TGCCAAGAATATTATCTCTTATCTTGACCAGATGGATTGACTTCAAGGGGTGACAAAACAAAGCGAGCAACTGGAACATCTCCCCCTAGATGTTAAGTCT
GATTGACCGGTCATTCTCAACAAGCACTGTTTATTGAGAATGACCGGGGGAACTCTGAAATTTTCGGCTTAGTTGCCGGCAGCTTGCCGCCAACTCACTC
CTCTAGATAAGTATTTTGACTCGCGCCCCTTCCTCTTTTGAGACGTTGTGACACTTAGGGTGCGGAATGTGGG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1659 bp | 552 aa | 169 | 1827 | + | No |
Chemistry : DDE
ORF sequence :
MNQSTEIEVKNLDHLGLVAGIIDEIGIVEIINEQVSIERGEIVTAGQVVKAIILNGLGFVSRALYLFPQFFEDKATEHLLGEGIEPKHLNDDKIGRVMDK
LYQLNVSVIFLRISLAAVKKFGVATENSHLDSTSLSVEGEYKKEYPTVEILKSGAVGEEIETRQQPIKITYGYSRDRRPDLKQFMIDLIVSGDGDVPLFL
KVGDGNEADKAVFGQIAREFKKQVDFDSLIVGDSALYSKENLKLMKEMRWLSRVPLSIKEAQELVDSISEKELTDSEIPGYSWRETISNYGGIEQRWLLV
ESQARQESDLKKLEKKIEQEKKTAQEKIRQLSRREFENRAVALAIVKGLSDSLKYHQLTEIKVNLIPPESQQSKLKSKDDLPSQSYQVQAELELNLAAIE
RLKKRAGRFVLATNNLEKKRLSSEDILKKYKGQQAPERGFSFLKDPCFFAHSVFLKSPHRIEVMAMLMGLCLLVYTIGQRQLRLNLKQQETGLKNQLGKL
TDRPTLRWIFQNFQGIHLLRIQDNQKISNLTDERRNILRFFPKPCQEYYLLS
LYQLNVSVIFLRISLAAVKKFGVATENSHLDSTSLSVEGEYKKEYPTVEILKSGAVGEEIETRQQPIKITYGYSRDRRPDLKQFMIDLIVSGDGDVPLFL
KVGDGNEADKAVFGQIAREFKKQVDFDSLIVGDSALYSKENLKLMKEMRWLSRVPLSIKEAQELVDSISEKELTDSEIPGYSWRETISNYGGIEQRWLLV
ESQARQESDLKKLEKKIEQEKKTAQEKIRQLSRREFENRAVALAIVKGLSDSLKYHQLTEIKVNLIPPESQQSKLKSKDDLPSQSYQVQAELELNLAAIE
RLKKRAGRFVLATNNLEKKRLSSEDILKKYKGQQAPERGFSFLKDPCFFAHSVFLKSPHRIEVMAMLMGLCLLVYTIGQRQLRLNLKQQETGLKNQLGKL
TDRPTLRWIFQNFQGIHLLRIQDNQKISNLTDERRNILRFFPKPCQEYYLLS
Blast result :
Comments
ISMae10 is 70% aa similar to ISCwa1.
References
1] ISfinder annotation (2009)
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256