ISMlu1
- Family IS256
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Micrococcus luteus | Micrococcus luteus |
DNA section
IS Length : 1413 bp
Ends
IR Length : 21/26
IRL : GTCCCGCATAGTGGTGTAGCGCACGGTGACTGGGCACGTCGTTCCGGATG
IRR : GTCCCGAGTAGTGGTGTAACGCTCTGATCCTCCATTGGTGCTGTTAGGCG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CAGCGCCACCGATAG | TTGA | CCCCACCGATTCGG | 4 |
DNA sequence
GTCCCGCATAGTGGTGTAGCGCACGGTGACTGGGCACGTCGTTCCGGATGTGGACGCGGCCACCGTGTGATCCTTCGAGTCAACCTTCCACAGAATCCTC
GAACGGAGTCATCACGATGACCGCTCCTCATATTGTCGACCCTGCCGGCCTGCTCGGCGAAGCCCTGTCCGAAGCATCCCCGGATTTGATGCGTTCGTTG
CTGCAGACCGTGATCAACTCCCTGCTCTCCGCTGACGCCGACGCGGTGGTCGGCGCCGAATGGGGTAAACCCACCCCGGGCCGAGCTACCCAGCGCAACG
GGTACCGGCACCGGGACCTGGACACCCGGGTCGGGACCCTGGACGTGGCGATCCCCAAACTCAGGTCGGGCACGTACTTCCCGGAGTGGCTGCTCGAGCG
CCGCAAAAGGGCCGAATCCGCGCTGATCACGGTGGTCGCCGACTGCTACCTGGCCGGGGTCTCGACCCGGCGGATGGACAAACTGGTCAAGACCCTCGGG
ATCAACGCGCTGTCGAAGTCCCAGGTCTCGCGGATGGCCACCGAGCTGGACGAGCAGGTCGAGTCCTTCCGTCATCGCCCGCTCGGGGAGGCTGGGCCGT
TCACGTTCGTGGCCGCCGACGCGCTGAGCATGAAGGTCCGCGAGGGCGGCCGGGTGGTCAACGCCGTGGTGCTGCTGGCCACCGGGGTCAATGGTGACGG
CCACCGCGAGGTCCTCGGCCTGCGGGTGGCCACCTCGGAGACGGGGTCGGCGTGGAACGAGTTCTTCGCCGACCTGGTGGCCCGGGGCCTGACCGGAGTC
CGCCTGGTCACTTCCGACGCCCACACCGGGCTCAAGGACGCCATCGCCGCGAACCTGCCCGGAGCGACCTGGCAGCGGTGCCGGACCCACTACGCGGCGA
ACCTGATGGGCATCACCCCCAAGTCCATGTGGCCGGCCGTGAAGGCCATGCTGCACTCGGTGTATGACCAGCCCGACGCCGCCAGCGTGGACGCCCAGTT
CGACCGGCTGCTGGACTACGTCAGCGAAAAGCTGCCCGCGGTGGCCGAACACCTCGATGGTGCCCGGGCGGACATCCTGGCGTTCACCACGTTCCCCAAG
GACGTGTGGACCCAGATCTGGTCGAACAACCCGGCCGAACGGCTCAACCGCGAGATCCGGCGTCGCACCGACGCCGTGGGCATCTTCCCGAACCGGGCAG
CGATCGTGCGCCTGGTCGGGGCGGTGCTGGCTGAGCAGACCGATGAGTGGGCCGAGGGCCGCCGCTACCTCGGCCTCGAGGTGTTGGCCCGCTGCCGCCT
CACCACCGTGGACGACACCGGGAACGAGGTGAACGCCGAACCGGAAACCACCCTCGAACTCAGCGCCTAACAGCACCAATGGAGGATCAGAGCGTTACAC
CACTACTCGGGAC
GAACGGAGTCATCACGATGACCGCTCCTCATATTGTCGACCCTGCCGGCCTGCTCGGCGAAGCCCTGTCCGAAGCATCCCCGGATTTGATGCGTTCGTTG
CTGCAGACCGTGATCAACTCCCTGCTCTCCGCTGACGCCGACGCGGTGGTCGGCGCCGAATGGGGTAAACCCACCCCGGGCCGAGCTACCCAGCGCAACG
GGTACCGGCACCGGGACCTGGACACCCGGGTCGGGACCCTGGACGTGGCGATCCCCAAACTCAGGTCGGGCACGTACTTCCCGGAGTGGCTGCTCGAGCG
CCGCAAAAGGGCCGAATCCGCGCTGATCACGGTGGTCGCCGACTGCTACCTGGCCGGGGTCTCGACCCGGCGGATGGACAAACTGGTCAAGACCCTCGGG
ATCAACGCGCTGTCGAAGTCCCAGGTCTCGCGGATGGCCACCGAGCTGGACGAGCAGGTCGAGTCCTTCCGTCATCGCCCGCTCGGGGAGGCTGGGCCGT
TCACGTTCGTGGCCGCCGACGCGCTGAGCATGAAGGTCCGCGAGGGCGGCCGGGTGGTCAACGCCGTGGTGCTGCTGGCCACCGGGGTCAATGGTGACGG
CCACCGCGAGGTCCTCGGCCTGCGGGTGGCCACCTCGGAGACGGGGTCGGCGTGGAACGAGTTCTTCGCCGACCTGGTGGCCCGGGGCCTGACCGGAGTC
CGCCTGGTCACTTCCGACGCCCACACCGGGCTCAAGGACGCCATCGCCGCGAACCTGCCCGGAGCGACCTGGCAGCGGTGCCGGACCCACTACGCGGCGA
ACCTGATGGGCATCACCCCCAAGTCCATGTGGCCGGCCGTGAAGGCCATGCTGCACTCGGTGTATGACCAGCCCGACGCCGCCAGCGTGGACGCCCAGTT
CGACCGGCTGCTGGACTACGTCAGCGAAAAGCTGCCCGCGGTGGCCGAACACCTCGATGGTGCCCGGGCGGACATCCTGGCGTTCACCACGTTCCCCAAG
GACGTGTGGACCCAGATCTGGTCGAACAACCCGGCCGAACGGCTCAACCGCGAGATCCGGCGTCGCACCGACGCCGTGGGCATCTTCCCGAACCGGGCAG
CGATCGTGCGCCTGGTCGGGGCGGTGCTGGCTGAGCAGACCGATGAGTGGGCCGAGGGCCGCCGCTACCTCGGCCTCGAGGTGTTGGCCCGCTGCCGCCT
CACCACCGTGGACGACACCGGGAACGAGGTGAACGCCGAACCGGAAACCACCCTCGAACTCAGCGCCTAACAGCACCAATGGAGGATCAGAGCGTTACAC
CACTACTCGGGAC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1254 bp | 417 aa | 117 | 1370 | + | No |
Chemistry : DDE
ORF sequence :
MTAPHIVDPAGLLGEALSEASPDLMRSLLQTVINSLLSADADAVVGAEWGKPTPGRATQRNGYRHRDLDTRVGTLDVAIPKLRSGTYFPEWLLERRKRAE
SALITVVADCYLAGVSTRRMDKLVKTLGINALSKSQVSRMATELDEQVESFRHRPLGEAGPFTFVAADALSMKVREGGRVVNAVVLLATGVNGDGHREVL
GLRVATSETGSAWNEFFADLVARGLTGVRLVTSDAHTGLKDAIAANLPGATWQRCRTHYAANLMGITPKSMWPAVKAMLHSVYDQPDAASVDAQFDRLLD
YVSEKLPAVAEHLDGARADILAFTTFPKDVWTQIWSNNPAERLNREIRRRTDAVGIFPNRAAIVRLVGAVLAEQTDEWAEGRRYLGLEVLARCRLTTVDD
TGNEVNAEPETTLELSA
SALITVVADCYLAGVSTRRMDKLVKTLGINALSKSQVSRMATELDEQVESFRHRPLGEAGPFTFVAADALSMKVREGGRVVNAVVLLATGVNGDGHREVL
GLRVATSETGSAWNEFFADLVARGLTGVRLVTSDAHTGLKDAIAANLPGATWQRCRTHYAANLMGITPKSMWPAVKAMLHSVYDQPDAASVDAQFDRLLD
YVSEKLPAVAEHLDGARADILAFTTFPKDVWTQIWSNNPAERLNREIRRRTDAVGIFPNRAAIVRLVGAVLAEQTDEWAEGRRYLGLEVLARCRLTTVDD
TGNEVNAEPETTLELSA
Blast result :
Comments
ISMlu1 is 92% aa smilar to IS1601.
References
1] ISfinder annotation (2008)