ISMae7
- Family IS4
- Group IS50
Isoform Synonym(s) ISMae5
Accession number | Transposition | Origin | Host |
---|---|---|---|
EF115385 | ND | Microcystis aeruginosa | Microcystis aeruginosa NIVA-CYA 228/1 |
DNA section
IS Length : 1589 bp
Ends
IR Length : 29
IRL : GCTATCCATTAGTCAGATCTTTCTTAACAAAAAGAGAAGAAACTTAAAAA
IRR : GCTATCCATTAGTCACATCTTTCTTAACATAAAATTTGACAAAAAGAGAA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TAATCCCCCC | TTGATAA | GGGGGGTGTC | 7 |
DNA sequence
GCTATCCATTAGTCAGATCTTTCTTAACAAAAAGAGAAGAAACTTAAAAAAAGGGGAAACGATTGATAGGTATAGTTTTGAAAGAAGGAATTAAGGTGGA
GGTAAGCAAAAAAATGGAGAAATGGGCAGCCCAAGAATTACAGTATGCAGACCTAGGGGACACCAGAAGAAAGAAAAGGTTAATCAGTATCGTAGAAAAC
TTGGCCAGTCAACCTAGTACAAGTGTGCCACAAGCTTCGGGAAATCTAGCCGCAGCGAGTGCCACCTACGACTTTTGGAATTCCCCCTATTTTCACCCCT
CAGATATAATTGCCGCCCAAGCCAAAAGTACAGTAGAAAGAATCAAAGAACATCCAATAGTTTTGGCAGTGCAAGACACAACAAGTTTAGACTTTACGAC
CCAAAAAGCCAAAAAGGGAATGGGTTATCTAGATTATAAAAAATCCTTTGGTCTCAAAGTTCATACCACCTTAGGAGTGTCACCGCAAGGAATACCTTTA
GGACTGATTAATCAATATGTCTGGGCAAGAGAAGAAAAGAATTTAGGGATTGCCAAGCAAAGAAAAAAAAGAGAAACCGAAGAAAAAGAAAGTCAAAGAT
GGTTAGATTCTTTGTCAGAAACACAACAACAAATACCCGAAGATATTCAAGTAGTAACAATCGGAGATTGTGAGGCAGACATATTTGATTTATTTGCCCA
ATCAAGAAGTCCTAACTCTCATTTATTAATCCGAGGAACTCATAACCGAAAAGTTAACTATCTCGAAGACAAGCAAAAGTCAGGGCATCCAGAGCCTAAA
TATTTACATCAATCCATCAGAGAAATAAAAGCCTGTGGTAGCCTAGATGTGCAAGTAAAACGCAATCCTAATCACGAGGCTAGACTAGCTAAACTAACAG
TTAGATTTGCCAGTTTTGAAATACAAGTACCTAAGCATCACTCGAAAGCGAACCCTCGTCAACCGGTCAAATTACAGGTAATTTTAGCTGAAGAAGAAAA
TCCGCGTCCCGGAGTTAATCCTATCAGTTGGCTCCTCTTAACTAGCCTAGACATTAGTAGCTTTGAATCGGCGATAACCTGTGTGCGCTGGTATAGTTAT
CGCTGGTTAATAGAACGCTATCATTTTGCTTTAAAAAGTGGTTGTGGATTAGAAAAACTGCAATTAGAAACGGGTCGTAGAATTGAGATGGCCTTAGCTA
CCTATTCAATTGTAGCCTGGAGATTACTCTGGTTAACCTATCAAGCACGCTTACACGGAGAGGAGAGTTGTGAAAGTTTTTTGGAAGAACATGAATGGCA
ATCTTTGTGTGCCACTATTCATAAAAAGAGTCCGCCACCTGAAAAGCCGCCCTCCTTTCGAGAAGCGGTCAGAATGATTGCTTCTCTTGGGGGGTTTTTA
GGTAGAAAAGGTGACGGTGAACCAGGTGTTAAAACTATTTGGTTGGGACTGCGAAGGTTACATGATATCAGCCAGACTTGGAAACTATCTCATCAAATTA
GTCCCCCCATAGAACCCCCTTGAGCCATCTTGCACACTTTTCTCTTTTTGTCAAATTTTATGTTAAGAAAGATGTGACTAATGGATAGC
GGTAAGCAAAAAAATGGAGAAATGGGCAGCCCAAGAATTACAGTATGCAGACCTAGGGGACACCAGAAGAAAGAAAAGGTTAATCAGTATCGTAGAAAAC
TTGGCCAGTCAACCTAGTACAAGTGTGCCACAAGCTTCGGGAAATCTAGCCGCAGCGAGTGCCACCTACGACTTTTGGAATTCCCCCTATTTTCACCCCT
CAGATATAATTGCCGCCCAAGCCAAAAGTACAGTAGAAAGAATCAAAGAACATCCAATAGTTTTGGCAGTGCAAGACACAACAAGTTTAGACTTTACGAC
CCAAAAAGCCAAAAAGGGAATGGGTTATCTAGATTATAAAAAATCCTTTGGTCTCAAAGTTCATACCACCTTAGGAGTGTCACCGCAAGGAATACCTTTA
GGACTGATTAATCAATATGTCTGGGCAAGAGAAGAAAAGAATTTAGGGATTGCCAAGCAAAGAAAAAAAAGAGAAACCGAAGAAAAAGAAAGTCAAAGAT
GGTTAGATTCTTTGTCAGAAACACAACAACAAATACCCGAAGATATTCAAGTAGTAACAATCGGAGATTGTGAGGCAGACATATTTGATTTATTTGCCCA
ATCAAGAAGTCCTAACTCTCATTTATTAATCCGAGGAACTCATAACCGAAAAGTTAACTATCTCGAAGACAAGCAAAAGTCAGGGCATCCAGAGCCTAAA
TATTTACATCAATCCATCAGAGAAATAAAAGCCTGTGGTAGCCTAGATGTGCAAGTAAAACGCAATCCTAATCACGAGGCTAGACTAGCTAAACTAACAG
TTAGATTTGCCAGTTTTGAAATACAAGTACCTAAGCATCACTCGAAAGCGAACCCTCGTCAACCGGTCAAATTACAGGTAATTTTAGCTGAAGAAGAAAA
TCCGCGTCCCGGAGTTAATCCTATCAGTTGGCTCCTCTTAACTAGCCTAGACATTAGTAGCTTTGAATCGGCGATAACCTGTGTGCGCTGGTATAGTTAT
CGCTGGTTAATAGAACGCTATCATTTTGCTTTAAAAAGTGGTTGTGGATTAGAAAAACTGCAATTAGAAACGGGTCGTAGAATTGAGATGGCCTTAGCTA
CCTATTCAATTGTAGCCTGGAGATTACTCTGGTTAACCTATCAAGCACGCTTACACGGAGAGGAGAGTTGTGAAAGTTTTTTGGAAGAACATGAATGGCA
ATCTTTGTGTGCCACTATTCATAAAAAGAGTCCGCCACCTGAAAAGCCGCCCTCCTTTCGAGAAGCGGTCAGAATGATTGCTTCTCTTGGGGGGTTTTTA
GGTAGAAAAGGTGACGGTGAACCAGGTGTTAAAACTATTTGGTTGGGACTGCGAAGGTTACATGATATCAGCCAGACTTGGAAACTATCTCATCAAATTA
GTCCCCCCATAGAACCCCCTTGAGCCATCTTGCACACTTTTCTCTTTTTGTCAAATTTTATGTTAAGAAAGATGTGACTAATGGATAGC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1410 bp | 469 aa | 114 | 1523 | + | No |
Chemistry : DDE
ORF sequence :
MEKWAAQELQYADLGDTRRKKRLISIVENLASQPSTSVPQASGNLAAASATYDFWNSPYFHPSDIIAAQAKSTVERIKEHPIVLAVQDTTSLDFTTQKAK
KGMGYLDYKKSFGLKVHTTLGVSPQGIPLGLINQYVWAREEKNLGIAKQRKKRETEEKESQRWLDSLSETQQQIPEDIQVVTIGDCEADIFDLFAQSRSP
NSHLLIRGTHNRKVNYLEDKQKSGHPEPKYLHQSIREIKACGSLDVQVKRNPNHEARLAKLTVRFASFEIQVPKHHSKANPRQPVKLQVILAEEENPRPG
VNPISWLLLTSLDISSFESAITCVRWYSYRWLIERYHFALKSGCGLEKLQLETGRRIEMALATYSIVAWRLLWLTYQARLHGEESCESFLEEHEWQSLCA
TIHKKSPPPEKPPSFREAVRMIASLGGFLGRKGDGEPGVKTIWLGLRRLHDISQTWKLSHQISPPIEPP
KGMGYLDYKKSFGLKVHTTLGVSPQGIPLGLINQYVWAREEKNLGIAKQRKKRETEEKESQRWLDSLSETQQQIPEDIQVVTIGDCEADIFDLFAQSRSP
NSHLLIRGTHNRKVNYLEDKQKSGHPEPKYLHQSIREIKACGSLDVQVKRNPNHEARLAKLTVRFASFEIQVPKHHSKANPRQPVKLQVILAEEENPRPG
VNPISWLLLTSLDISSFESAITCVRWYSYRWLIERYHFALKSGCGLEKLQLETGRRIEMALATYSIVAWRLLWLTYQARLHGEESCESFLEEHEWQSLCA
TIHKKSPPPEKPPSFREAVRMIASLGGFLGRKGDGEPGVKTIWLGLRRLHDISQTWKLSHQISPPIEPP
Blast result :
Comments
ISMae7 is 48% aa similar to ISAzo5.
References
1] Tooming-Klunderud, A. (2007) Direct submission.