ISMae27
- Family IS630
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_010296 | ND | Microcystis aeruginosa | Microcystis aeruginosa NIES-843 |
DNA section
IS Length : 1140 bp
Ends
IR Length : 14/15
IRL : TACCATTTTTCAAAAAGTATGTCATACTTGGTAAAGGTATAGTTTGTGTG
IRR : TACCATTTTTCTAAATTCCTGACAGACATAGAGCTTCTAAAATCCAAGAC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CTCTACGGTA | TTA | CCCACGGTAT | 3 |
ACCCGAAGAA | TTA | TAATTGGTGC | 3 |
CGATCAAGTC | TAA | GCGATGATTG | 3 |
CCAATGATTG | TAA | CACCAGATAT | 3 |
TTCCCCAAAC | TTA | CATTAGTAAC | 3 |
AGTAATAACC | TTA | GTCCTGTCCT | 3 |
AAATTTGGTA | TTA | TGTGACAGTT | 3 |
TACCTCCACC | TTA | ATTCCTTCTT | 3 |
TTTTTCTACT | TGA | CTCAATTGGC | 3 |
DNA sequence
TACCATTTTTCAAAAAGTATGTCATACTTGGTAAAGGTATAGTTTGTGTGGTAAAAAGGCAATGAGTGGAGTCCCTAATATTAATGTTGCTGAGTCAGTA
GAAGACTTAAAATCCTTGTTGAAGCAACAAGTAACCTCTTTAAACTTTGCTAAAGTACAATCCCTGTATCTACTAAAAATTAAGGAGGTAGAAACGGTTC
GTCATCTCGCCGTGTTAATAGGACGCTCAGAAAGAACTATTCATCGCTGGTTAAGTTGTTATCGAGAAGGAGGGATAGAAAATCTCTTGTCAGAACCAGA
AAAACTGGGAAGACCCAAAAAGATTTCAGTGGAAGAAGCCGCTCTAATTCAGAATGAATTAAAAGACCCAGAAGGATTTCAAAGTTATAAAGAAATTCAT
TTTTGGGTATCAATTATTTTAGAAATACCCACCAGTTATATAACTGTTTACCGTCTCGTAAGAAATGAATTACAAGCTAAATTAAAAGTGGCTCGACCTC
AAAATTTAAAACAATTACCAGGAGAAGTAAAAATATTCCAAAATAATCTATCTGAACAGCTACAAGCTTTACTAGAAAAGGAATCTGAAAAAGTTAGTCA
ATATTTAAAAGTCCGCTTCTGGTGTCAAGATGAAAGTCGCTTCGGCTGTCATACCATTGTCAGAGATAAAATAACAATTAAAGGCATAAAGCCCCTTGGT
AATTTTCAGTATAATTTTCAATATCTCTGGCTCTATGGTTTAATAGAACCTCGAACAGGTAGCAGTTTTTTCTATGAATTTTCTCATTTAGATGGGGAAT
GTTTTAATCAATATTTAACGCTTTTTTCTCAAGCTTTTTCTGAGGAATTACATATTATTCAATTAGATAATGCTCCCGCACATACGGCGACCGACCTAGA
AATACCTGATAATATTATCCTATTTTATCAACCTCCCTATTGTCCAGAAGTAAATCCAATTGAGAGAGTTTGGCTATATTTGAAAAACCTATTGGCCTGG
GGCAATTTTAACTCCCTTGATAACTTAAGAAGTAAACTTTACCATCTTTTAAATTCTCTATCCAATGACACGATCGGGTATTTGACGGGATGGTCTTGGA
TTTTAGAAGCTCTATGTCTGTCAGGAATTTAGAAAAATGGTA
GAAGACTTAAAATCCTTGTTGAAGCAACAAGTAACCTCTTTAAACTTTGCTAAAGTACAATCCCTGTATCTACTAAAAATTAAGGAGGTAGAAACGGTTC
GTCATCTCGCCGTGTTAATAGGACGCTCAGAAAGAACTATTCATCGCTGGTTAAGTTGTTATCGAGAAGGAGGGATAGAAAATCTCTTGTCAGAACCAGA
AAAACTGGGAAGACCCAAAAAGATTTCAGTGGAAGAAGCCGCTCTAATTCAGAATGAATTAAAAGACCCAGAAGGATTTCAAAGTTATAAAGAAATTCAT
TTTTGGGTATCAATTATTTTAGAAATACCCACCAGTTATATAACTGTTTACCGTCTCGTAAGAAATGAATTACAAGCTAAATTAAAAGTGGCTCGACCTC
AAAATTTAAAACAATTACCAGGAGAAGTAAAAATATTCCAAAATAATCTATCTGAACAGCTACAAGCTTTACTAGAAAAGGAATCTGAAAAAGTTAGTCA
ATATTTAAAAGTCCGCTTCTGGTGTCAAGATGAAAGTCGCTTCGGCTGTCATACCATTGTCAGAGATAAAATAACAATTAAAGGCATAAAGCCCCTTGGT
AATTTTCAGTATAATTTTCAATATCTCTGGCTCTATGGTTTAATAGAACCTCGAACAGGTAGCAGTTTTTTCTATGAATTTTCTCATTTAGATGGGGAAT
GTTTTAATCAATATTTAACGCTTTTTTCTCAAGCTTTTTCTGAGGAATTACATATTATTCAATTAGATAATGCTCCCGCACATACGGCGACCGACCTAGA
AATACCTGATAATATTATCCTATTTTATCAACCTCCCTATTGTCCAGAAGTAAATCCAATTGAGAGAGTTTGGCTATATTTGAAAAACCTATTGGCCTGG
GGCAATTTTAACTCCCTTGATAACTTAAGAAGTAAACTTTACCATCTTTTAAATTCTCTATCCAATGACACGATCGGGTATTTGACGGGATGGTCTTGGA
TTTTAGAAGCTCTATGTCTGTCAGGAATTTAGAAAAATGGTA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1071 bp | 356 aa | 62 | 1132 | + | No |
Chemistry : DDE
ORF sequence :
MSGVPNINVAESVEDLKSLLKQQVTSLNFAKVQSLYLLKIKEVETVRHLAVLIGRSERTIHRWLSCYREGGIENLLSEPEKLGRPKKISVEEAALIQNEL
KDPEGFQSYKEIHFWVSIILEIPTSYITVYRLVRNELQAKLKVARPQNLKQLPGEVKIFQNNLSEQLQALLEKESEKVSQYLKVRFWCQDESRFGCHTIV
RDKITIKGIKPLGNFQYNFQYLWLYGLIEPRTGSSFFYEFSHLDGECFNQYLTLFSQAFSEELHIIQLDNAPAHTATDLEIPDNIILFYQPPYCPEVNPI
ERVWLYLKNLLAWGNFNSLDNLRSKLYHLLNSLSNDTIGYLTGWSWILEALCLSGI
KDPEGFQSYKEIHFWVSIILEIPTSYITVYRLVRNELQAKLKVARPQNLKQLPGEVKIFQNNLSEQLQALLEKESEKVSQYLKVRFWCQDESRFGCHTIV
RDKITIKGIKPLGNFQYNFQYLWLYGLIEPRTGSSFFYEFSHLDGECFNQYLTLFSQAFSEELHIIQLDNAPAHTATDLEIPDNIILFYQPPYCPEVNPI
ERVWLYLKNLLAWGNFNSLDNLRSKLYHLLNSLSNDTIGYLTGWSWILEALCLSGI
Blast result :
Comments
ISMae27 is 59% aa similar to ISAcma28.
References
1] Modified and submitted by ISfinder (2010)
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.